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    Rsl24d1 ribosomal L24 domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 363099, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rsl24d1provided by RGD
    Official Full Name
    ribosomal L24 domain containing 1provided by RGD
    Primary source
    RGD:1309784
    See related
    EnsemblRapid:ENSRNOG00000052787 AllianceGenome:RGD:1309784
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309784
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human RSL24D1 (ribosomal L24 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 274.2), Thymus (RPKM 232.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Rsl24d1 in Genome Data Viewer
    Location:
    8q24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (82733627..82742632)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (73852991..73861996)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (79792587..79801592)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene KH domain containing 3, subcortical maternal complex member Neighboring gene small ribosomal subunit protein eS10-like Neighboring gene eukaryotic translation initiation factor 1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable ribosome biogenesis protein RLP24
    Names
    60S ribosomal protein L30 isolog
    homolog of yeast ribosomal like protein 24
    my024 protein
    ribosomal L24 domain-containing protein 1
    NP_001014234.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014212.2NP_001014234.2  probable ribosome biogenesis protein RLP24

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/Swiss-Prot
      Q6P6G7
      UniProtKB/TrEMBL
      A0A8I6AUC9, A6KEK4
      Related
      ENSRNOP00000068858.3, ENSRNOT00000091698.3
      Conserved Domains (1) summary
      pfam01246
      Location:264
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      82733627..82742632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)