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    ZBTB10 zinc finger and BTB domain containing 10 [ Motacilla alba alba ]

    Gene ID: 119697472, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ZBTB10
    Gene description
    zinc finger and BTB domain containing 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Motacilla alba alba (sub-species: alba)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Motacilla_alba_V1.0_pri (GCF_015832195.1) 2 NC_052017.1 (123167515..123195376)

    Chromosome 2 - NC_052017.1Genomic Context describing neighboring genes Neighboring gene hes related family bHLH transcription factor with YRPW motif 1 Neighboring gene tumor protein D52 Neighboring gene uncharacterized LOC119697473 Neighboring gene zinc finger protein 704 Neighboring gene phosphoprotein membrane anchor with glycosphingolipid microdomains 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052017.1 Chromosome 2 Reference Motacilla_alba_V1.0_pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Motacilla alba alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Motacilla_alba_V1.0_pri Primary Assembly

    Genomic

    1. NC_052017.1 Reference Motacilla_alba_V1.0_pri Primary Assembly

      Range
      123167515..123195376
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038128278.1 → XP_037984206.1  zinc finger and BTB domain-containing protein 10

      Conserved Domains (4) summary
      sd00017
      Location:678 → 698
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18201
      Location:330 → 451
      BTB_POZ_ZBTB10; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 10 (ZBTB10)
      pfam13465
      Location:691 → 715
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:676 → 700
      zf-H2C2_5; C2H2-type zinc-finger domain
    Nucleotide Protein
    Heading Accession and Version

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