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    Pus7 pseudouridine synthase 7 [ Arvicola amphibius (Eurasian water vole) ]

    Gene ID: 119803999, updated on 21-Mar-2024

    Summary

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    Gene symbol
    Pus7
    Gene description
    pseudouridine synthase 7
    See related
    EnsemblRapid:ENSAAPG00005023014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicola amphibius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
    Orthologs
    human mouse all
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    Genomic context

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    See Pus7 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current mArvAmp1.2 (GCF_903992535.2) 18 NC_052064.1 (7286443..7323717, complement)
    100 previous assembly mArvAmp1.1 (GCF_903992535.1) 18 NC_052064.1 (7286443..7323717, complement)

    Chromosome 18 - NC_052064.1Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 2E (inactive) Neighboring gene SRSF protein kinase 2 Neighboring gene RAD50 interactor 1 Neighboring gene zinc finger protein 431-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvAmp1.2

    Genomic

    1. NC_052064.1 Reference mArvAmp1.2

      Range
      7286443..7323717 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038315537.1 → XP_038171465.1  LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog

      Related
      ENSAAPP00005029461.1, ENSAAPT00005032472.2
      Conserved Domains (1) summary
      cd02576
      Location:126 → 645
      PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
    Nucleotide Protein
    Heading Accession and Version

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