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    pqn-83 CX domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176729, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pqn-83
    Official Full Name
    CX domain-containing protein
    Primary source
    WormBase:WBGene00004164
    Locus tag
    CELE_Y39E4B.3
    See related
    AllianceGenome:WB:WBGene00004164
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pqn-83 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (13087475..13099461, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene IK cytokine;Smad nuclear-interacting protein 1 Neighboring gene Uncharacterized protein Neighboring gene Palmitoyltransferase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CX domain-containing protein
    NP_001367104.1
    • Confirmed by transcript evidence
    NP_001379252.1
    • Confirmed by transcript evidence
    NP_001379425.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      13087475..13099461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392224.1 → NP_001379425.1  CX domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q69YZ1
      Conserved Domains (1) summary
      pfam01705
      Location:235 → 266
      CX; CX module

    2. NM_001392223.1 → NP_001379252.1  CX domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2K1
      Conserved Domains (1) summary
      pfam01705
      Location:235 → 266
      CX; CX module

    3. NM_001379973.1 → NP_001367104.1  CX domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q69YZ0
      Conserved Domains (1) summary
      pfam01705
      Location:235 → 266
      CX; CX module
    Nucleotide Protein
    Heading Accession and Version

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