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    C44H4.4 Chorein N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181552, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C44H4.4
    Official Full Name
    Chorein N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00008094
    Locus tag
    CELE_C44H4.4
    See related
    AllianceGenome:WB:WBGene00008094
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including head; intestine; nervous system; pharynx; and vulval muscle. Orthologous to human BLTP3A (bridge-like lipid transfer protein family member 3A) and BLTP3B (bridge-like lipid transfer protein family member 3B). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C44H4.4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    19
    Sequence:
    Chromosome: X; NC_003284.9 (14568856..14589101, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-3 Neighboring gene ncRNA Neighboring gene LRRCT domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Leucine-rich repeat-containing protein let-4 Neighboring gene ncRNA Neighboring gene Leucine-rich repeat-containing protein let-4 Neighboring gene TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C30F12.4 influences oogenesis, fat metabolism, and lifespan in C. elegans. Wang L, et al. Protein Cell, 2016 Oct. PMID 27638466, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Chorein N-terminal domain-containing protein
    NP_510427.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      14568856..14589101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078026.7 → NP_510427.2  Chorein N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510427.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EE16
      Conserved Domains (2) summary
      COG5043
      Location:3 → 214
      MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
      pfam12624
      Location:3 → 96
      Chorein_N; N-terminal region of Chorein or VPS13
    Nucleotide Protein
    Heading Accession and Version

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