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    ZBTB10 zinc finger and BTB domain containing 10 [ Pipra filicauda (Wire-tailed manakin) ]

    Gene ID: 114003580, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ZBTB10
    Gene description
    zinc finger and BTB domain containing 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pipra filicauda
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pipra
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB10 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current ASM394559v2 (GCF_003945595.2) Unplaced Scaffold NW_024104533.1 (190143..217419, complement)
    100 previous assembly ASM394559v1 (GCF_003945595.1) Unplaced Scaffold NW_020894166.1 (581418..610947, complement)

    NW_024104533.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 704 Neighboring gene uncharacterized LOC120324026 Neighboring gene tumor protein D52 Neighboring gene hes related family bHLH transcription factor with YRPW motif 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pipra filicauda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM394559v2

    Genomic

    1. NW_024104533.1 Reference ASM394559v2

      Range
      190143..217419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027750700.2 → XP_027606501.1  zinc finger and BTB domain-containing protein 10

      UniProtKB/TrEMBL
      A0A6J2J3B5
    Nucleotide Protein
    Heading Accession and Version

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