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    LOC120773648 sex-lethal homolog [ Bactrocera tryoni ]

    Gene ID: 120773648, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC120773648
    Gene description
    sex-lethal homolog
    See related
    EnsemblRapid:LOC120773648
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bactrocera tryoni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
    Also known as
    Sxl
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC120773648 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current CSIRO_BtryS06_freeze2 (GCF_016617805.1) 4 NC_052502.1 (75548645..75610937, complement)

    Chromosome 4 - NC_052502.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4d1-like Neighboring gene Cytochrome P450 4d1 Neighboring gene gram-negative bacteria-binding protein 3-like Neighboring gene gram-negative bacteria-binding protein 3-like Neighboring gene Cytochrome P450 4d2 Neighboring gene Cytochrome P450 4ae1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052502.1 Chromosome 4 Reference CSIRO_BtryS06_freeze2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression patterns of sex-determination genes in single male and female embryos of two Bactrocera fruit fly species during early development. Morrow JL, et al. Insect Mol Biol, 2014 Dec. PMID 25116961
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sex determination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sex-lethal homolog
    Names
    sex-lethal-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bactrocera tryoni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSIRO_BtryS06_freeze2 Primary Assembly

    Genomic

    1. NC_052502.1 Reference CSIRO_BtryS06_freeze2 Primary Assembly

      Range
      75548645..75610937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040102659.1 → XP_039958593.1  sex-lethal homolog isoform X4

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958593.1, XM_040102659.1
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 321
      sex-lethal; sex-lethal family splicing factor

    2. XM_040102657.1 → XP_039958591.1  sex-lethal homolog isoform X2

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958591.1, XM_040102657.1
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 332
      sex-lethal; sex-lethal family splicing factor

    3. XM_040102656.1 → XP_039958590.1  sex-lethal homolog isoform X1

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958590.1, XM_040102656.1
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 329
      sex-lethal; sex-lethal family splicing factor

    4. XM_040102661.1 → XP_039958595.1  sex-lethal homolog isoform X6

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958595.1, XM_040102661.1
      Conserved Domains (1) summary
      TIGR01659
      Location:4 → 311
      sex-lethal; sex-lethal family splicing factor

    5. XM_040102658.1 → XP_039958592.1  sex-lethal homolog isoform X3

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958592.1, XM_040102658.1
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 350
      sex-lethal; sex-lethal family splicing factor

    6. XM_040102660.1 → XP_039958594.1  sex-lethal homolog isoform X5

      UniProtKB/TrEMBL
      A0A076VA77
      Related
      XP_039958594.1, XM_040102660.1
      Conserved Domains (1) summary
      TIGR01659
      Location:1 → 342
      sex-lethal; sex-lethal family splicing factor
    Nucleotide Protein
    Heading Accession and Version

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