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    MTHFSD methenyltetrahydrofolate synthetase domain containing [ Rana temporaria (common frog) ]

    Gene ID: 120918009, updated on 21-Mar-2024

    Summary

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    Gene symbol
    MTHFSD
    Gene description
    methenyltetrahydrofolate synthetase domain containing
    See related
    EnsemblRapid:ENSRTEG00010002165
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See MTHFSD in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) 11 NC_053499.1 (164300682..164311815)

    Chromosome 11 - NC_053499.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120916860 Neighboring gene piezo type mechanosensitive ion channel component 1 (Er blood group) Neighboring gene piezo-type mechanosensitive ion channel component 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053499.1 Chromosome 11 Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methenyltetrahydrofolate synthase domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NC_053499.1 Reference aRanTem1.1

      Range
      164300682..164311815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040329673.1 → XP_040185607.1  methenyltetrahydrofolate synthase domain-containing protein isoform X1

      Related
      ENSRTEP00010001410.1, ENSRTET00010002895.1
      Conserved Domains (2) summary
      smart00360
      Location:302 → 368
      RRM; RNA recognition motif
      COG0212
      Location:17 → 216
      FAU1; 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]

    2. XM_040329674.1 → XP_040185608.1  methenyltetrahydrofolate synthase domain-containing protein isoform X2

      Related
      ENSRTEP00010001413.1, ENSRTET00010002898.1
      Conserved Domains (2) summary
      smart00360
      Location:302 → 368
      RRM; RNA recognition motif
      COG0212
      Location:17 → 216
      FAU1; 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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