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    ILK integrin linked kinase [ Bufo bufo (common toad) ]

    Gene ID: 120996657, updated on 21-Mar-2024

    Summary

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    Gene symbol
    ILK
    Gene description
    integrin linked kinase
    See related
    EnsemblRapid:ENSBBFG00005005723
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bufo bufo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
    Orthologs
    human mouse all
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    Genomic context

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    See ILK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current aBufBuf1.1 (GCF_905171765.1) 3 NC_053391.1 (705706356..705738340)

    Chromosome 3 - NC_053391.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120996655 Neighboring gene uncharacterized LOC120994246 Neighboring gene ribosomal RNA processing 8 Neighboring gene tripeptidyl peptidase 1 Neighboring gene keratin-associated protein 5-4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053391.1 Chromosome 3 Reference aBufBuf1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in integrin-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrin-linked protein kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aBufBuf1.1

    Genomic

    1. NC_053391.1 Reference aBufBuf1.1

      Range
      705706356..705738340
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040426764.1 → XP_040282698.1  integrin-linked protein kinase

      Conserved Domains (3) summary
      COG0666
      Location:27 → 169
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd14057
      Location:197 → 449
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      sd00045
      Location:33 → 64
      ANK; ANK repeat [structural motif]

    2. XM_040426766.1 → XP_040282700.1  integrin-linked protein kinase

      Related
      ENSBBFP00005008443.1, ENSBBFT00005008916.1
      Conserved Domains (3) summary
      COG0666
      Location:27 → 169
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd14057
      Location:197 → 449
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      sd00045
      Location:33 → 64
      ANK; ANK repeat [structural motif]

    3. XM_040426765.1 → XP_040282699.1  integrin-linked protein kinase

      Related
      ENSBBFP00005008420.1, ENSBBFT00005008891.1
      Conserved Domains (3) summary
      COG0666
      Location:27 → 169
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd14057
      Location:197 → 449
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      sd00045
      Location:33 → 64
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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