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    LOC121321370 periostin-like [ Polyodon spathula (Mississippi paddlefish) ]

    Gene ID: 121321370, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121321370
    Gene description
    periostin-like
    See related
    EnsemblRapid:ENSPAHG00005004214
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polyodon spathula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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    Genomic context

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    See LOC121321370 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    100 current ASM1765450v1 (GCF_017654505.1) 9 NC_054542.1 (1290249..1318177)

    Chromosome 9 - NC_054542.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier 1 Neighboring gene short transient receptor potential channel 4-like Neighboring gene uncharacterized LOC121320414 Neighboring gene regulatory factor X-associated protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054542.1 Chromosome 9 Reference ASM1765450v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    periostin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1765450v1 Primary Assembly

    Genomic

    1. NC_054542.1 Reference ASM1765450v1 Primary Assembly

      Range
      1290249..1318177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041260287.1 → XP_041116221.1  periostin-like isoform X4

      Conserved Domains (2) summary
      smart00554
      Location:270 → 367
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cl02663
      Location:497 → 635
      Fasciclin; Fasciclin domain

    2. XM_041260286.1 → XP_041116220.1  periostin-like isoform X3

      Conserved Domains (2) summary
      smart00554
      Location:270 → 367
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cl02663
      Location:497 → 635
      Fasciclin; Fasciclin domain

    3. XM_041260284.1 → XP_041116218.1  periostin-like isoform X1

      Related
      ENSPAHP00005006118.1, ENSPAHT00005006469.1
      Conserved Domains (2) summary
      smart00554
      Location:270 → 367
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cl02663
      Location:497 → 635
      Fasciclin; Fasciclin domain

    4. XM_041260285.1 → XP_041116219.1  periostin-like isoform X2

      Related
      ENSPAHP00005006129.1, ENSPAHT00005006479.1
      Conserved Domains (2) summary
      smart00554
      Location:270 → 367
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cl02663
      Location:497 → 635
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version

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