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    UHO2_03917 putative TPI1 - triose-phosphate isomerase [ Ustilago hordei ]

    Gene ID: 64864340, updated on 30-Nov-2023

    Summary

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    Gene symbol
    UHO2_03917
    Gene description
    putative TPI1 - triose-phosphate isomerase
    Locus tag
    UHO2_03917
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ustilago hordei (strain: Uho2)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago
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    Genomic context

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    See UHO2_03917 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_024545289.1Genomic Context describing neighboring genes Neighboring gene related to SAP155 - SIT4-associating protein Neighboring gene putative PFY1 - profilin Neighboring gene putative ERG10 - acetyl-CoA C-acetyltransferase, cytosolic Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024545289.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables triose-phosphate isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycerol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative TPI1 - triose-phosphate isomerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_024545289.1 Reference assembly

      Range
      373692..374546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041559874.1 → XP_041415808.1  putative TPI1 - triose-phosphate isomerase [Ustilago hordei]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I2FYM0
      Conserved Domains (1) summary
      PTZ00333
      Location:1 → 246
      PTZ00333; triosephosphate isomerase; Provisional
    Nucleotide Protein
    Heading Accession and Version