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    Wdr59 WD repeat domain 59 [ Microtus oregoni (creeping vole) ]

    Gene ID: 121447437, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Wdr59
    Gene description
    WD repeat domain 59
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microtus oregoni
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
    Orthologs
    human mouse all
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    Genomic context

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    See Wdr59 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    100 current Mior012 (GCF_018167655.1) Unplaced Scaffold NW_024543063.1 (45391871..45457789, complement)

    NW_024543063.1Genomic Context describing neighboring genes Neighboring gene N(G),N(G)-dimethylarginine dimethylaminohydrolase 1-like Neighboring gene fatty acid 2-hydroxylase Neighboring gene zinc and ring finger 1 Neighboring gene lactate dehydrogenase D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024543063 Unplaced Scaffold Reference Mior012

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GATOR complex protein WDR59

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microtus oregoni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mior012

    Genomic

    1. NW_024543063.1 Reference Mior012

      Range
      45391871..45457789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041650661.1 → XP_041506595.1  GATOR complex protein WDR59 isoform X2

      Conserved Domains (4) summary
      smart00591
      Location:401 → 501
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      sd00039
      Location:62 → 103
      7WD40; WD40 repeat [structural motif]
      cd16692
      Location:929 → 975
      mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
      cl29593
      Location:100 → 343
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_041650660.1 → XP_041506594.1  GATOR complex protein WDR59 isoform X1

      Conserved Domains (4) summary
      smart00591
      Location:401 → 501
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      sd00039
      Location:62 → 103
      7WD40; WD40 repeat [structural motif]
      cd16692
      Location:948 → 994
      mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
      cl29593
      Location:100 → 343
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_041650662.1 → XP_041506596.1  GATOR complex protein WDR59 isoform X3

      Conserved Domains (4) summary
      smart00591
      Location:362 → 462
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      sd00039
      Location:23 → 64
      7WD40; WD40 repeat [structural motif]
      cd16692
      Location:909 → 955
      mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
      cl29593
      Location:61 → 304
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_041650663.1 → XP_041506597.1  GATOR complex protein WDR59 isoform X4

      Conserved Domains (4) summary
      smart00591
      Location:301 → 401
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      sd00039
      Location:54 → 88
      7WD40; WD40 repeat [structural motif]
      cd16692
      Location:848 → 894
      mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
      cl29593
      Location:60 → 243
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_041650665.1 → XP_041506599.1  GATOR complex protein WDR59 isoform X4

      Conserved Domains (4) summary
      smart00591
      Location:301 → 401
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      sd00039
      Location:54 → 88
      7WD40; WD40 repeat [structural motif]
      cd16692
      Location:848 → 894
      mRING-H2-C3H3C2_WDR59; Modified RING finger, H2 subclass (C3H3C2-type), found in WD repeat-containing protein 59 (WDR59) and similar proteins
      cl29593
      Location:60 → 243
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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