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    LOC121587675 LIM domain-containing protein jub-like [ Anopheles merus ]

    Gene ID: 121587675, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC121587675
    Gene description
    LIM domain-containing protein jub-like
    See related
    VectorBase:AMEM21_006677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles merus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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    Genomic context

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    See LOC121587675 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current AmerM5.1 (GCF_017562075.2) 2R NC_054082.1 (55723107..55727247, complement)

    Chromosome 2R - NC_054082.1Genomic Context describing neighboring genes Neighboring gene putative thiamine transporter SLC35F3 Neighboring gene WD repeat-containing protein 6-like Neighboring gene RNA-binding protein 25-like Neighboring gene protein yellow-like Neighboring gene trypsin-like Neighboring gene Dolichyl-phosphate mannosyltransferase subunit 3 Neighboring gene Gamma-interferon-inducible lysosomal thiol reductase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054082.1 Chromosome 2R Reference AmerM5.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of hippo signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of miRNA-mediated gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: LIM domain-containing protein jub-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anopheles merus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AmerM5.1 Primary Assembly

    Genomic

    1. NC_054082.1 Reference AmerM5.1 Primary Assembly

      Range
      55723107..55727247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041904666.1 → XP_041760600.1  LOW QUALITY PROTEIN: LIM domain-containing protein jub-like

      UniProtKB/TrEMBL
      A0A182V2I3
      Conserved Domains (4) summary
      cd09352
      Location:683 → 736
      LIM1_Ajuba_like; The first LIM domain of Ajuba-like proteins
      cd09355
      Location:748 → 800
      LIM2_Ajuba_like; The second LIM domain of Ajuba-like proteins
      cd09438
      Location:808 → 869
      LIM3_Ajuba_like; The third LIM domain of Ajuba-like proteins
      PHA03369
      Location:367 → 660
      PHA03369; capsid maturational protease; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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