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    LOC107456194 calcium uptake protein 1 homolog, mitochondrial [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107456194, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107456194
    Gene description
    calcium uptake protein 1 homolog, mitochondrial
    See related
    EnsemblRapid:LOC107456194
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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    Genomic context

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    See LOC107456194 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024970389.1 (70374..103997, complement)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015488521.1 (193741..229520, complement)

    NW_024970389.1Genomic Context describing neighboring genes Neighboring gene protein LTV1 homolog Neighboring gene histone acetyltransferase KAT6B Neighboring gene alpha-latrotoxin-Lh1a-like Neighboring gene G-rich sequence factor 1 Neighboring gene EF-hand calcium-binding domain-containing protein 6-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. Kono N, et al. Mol Ecol Resour, 2016 May. PMID 26561354
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium import into the mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of uniplex complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium uptake protein 1 homolog, mitochondrial
    Names
    calcium uptake protein 1-like protein, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_3.0

    Genomic

    1. NW_024970389.1 Reference Ptep_3.0

      Range
      70374..103997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016073986.3 → XP_015929472.2  calcium uptake protein 1 homolog, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A2L2Y8H6
      Related
      XP_015929472.2, XM_016073986.3
      Conserved Domains (1) summary
      cd15900
      Location:275 → 494
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins

    2. XM_016073984.2 → XP_015929470.2  calcium uptake protein 1 homolog, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A2L2Y8H6
      Related
      XP_015929470.2, XM_016073984.2
      Conserved Domains (1) summary
      cd15900
      Location:292 → 511
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins

    3. XM_016073985.2 → XP_015929471.2  calcium uptake protein 1 homolog, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A2L2Y8H6
      Related
      XP_015929471.2, XM_016073985.2
      Conserved Domains (1) summary
      cd15900
      Location:275 → 494
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins

    4. XM_016073982.2 → XP_015929468.2  calcium uptake protein 1 homolog, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A2L2Y8H6
      Related
      XP_015929468.2, XM_016073982.2
      Conserved Domains (1) summary
      cd15900
      Location:292 → 511
      EFh_MICU; EF-hand, calcium binding motif, found in mitochondrial calcium uptake proteins MICU1, MICU2, MICU3, and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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