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    LOC123025795 lethal(3)malignant brain tumor-like protein 3 [ Varanus komodoensis (Komodo dragon) ]

    Gene ID: 123025795, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC123025795
    Gene description
    lethal(3)malignant brain tumor-like protein 3
    Locus tag
    EYD10_11155
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Varanus komodoensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
    Also known as
    L3MBTL3
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    Genomic context

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    See LOC123025795 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335759.1 (4629601..4689819)

    NW_025335759.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 244-like Neighboring gene serine and arginine rich splicing factor 4 Neighboring gene transmembrane protein 200B Neighboring gene erythrocyte membrane protein band 4.1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025335759 Unplaced Scaffold Reference ASM479886v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 3; lethal(3)malignant brain tumor-like protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM479886v1

    Genomic

    1. NW_025335759.1 Reference ASM479886v1

      Range
      4629601..4689819
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044434814.1 → XP_044290749.1  lethal(3)malignant brain tumor-like protein 4 isoform X4

      Conserved Domains (2) summary
      cd09582
      Location:707 → 772
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:195 → 291
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    2. XM_044434813.1 → XP_044290748.1  lethal(3)malignant brain tumor-like protein 4 isoform X3

      Conserved Domains (2) summary
      cd09582
      Location:716 → 780
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:204 → 300
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    3. XM_044434812.1 → XP_044290747.1  lethal(3)malignant brain tumor-like protein 3 isoform X2

      Conserved Domains (2) summary
      cd09582
      Location:715 → 780
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:204 → 300
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    4. XM_044434811.1 → XP_044290746.1  lethal(3)malignant brain tumor-like protein 4 isoform X1

      Conserved Domains (2) summary
      cd09582
      Location:716 → 781
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:204 → 300
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    5. XM_044434815.1 → XP_044290750.1  lethal(3)malignant brain tumor-like protein 4 isoform X5

      Conserved Domains (2) summary
      cd09582
      Location:704 → 769
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:192 → 288
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    Nucleotide Protein
    Heading Accession and Version

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