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    LOC110941174 S-adenosylmethionine synthase 5 [ Helianthus annuus (common sunflower) ]

    Gene ID: 110941174, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC110941174
    Gene description
    S-adenosylmethionine synthase 5
    Locus tag
    HanXRQr2_Chr05g0218761
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Helianthus annuus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
    Also known as
    METK2
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    Genomic context

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    See LOC110941174 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 5 NC_035437.2 (123974583..123977191)
    100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 5 NC_035437.1 (149989682..149992254, complement)

    Chromosome 5 - NC_035437.2Genomic Context describing neighboring genes Neighboring gene protein GFS12 Neighboring gene uncharacterized LOC110943545 Neighboring gene squamosa promoter-binding-like protein 1 Neighboring gene uncharacterized LOC110941172 Neighboring gene small nucleolar RNA SNORD34

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methionine adenosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in S-adenosylmethionine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    S-adenosylmethionine synthase 5
    Names
    S-adenosylmethionine synthetase
    putative S-adenosylmethionine synthase 2
    putative methionine adenosyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HanXRQr2.0-SUNRISE Primary Assembly

    Genomic

    1. NC_035437.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

      Range
      123974583..123977191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022182791.2 → XP_022038483.1  S-adenosylmethionine synthase 5

      UniProtKB/TrEMBL
      A0A251UR40, A0A9K3J0T4
      Conserved Domains (1) summary
      PLN02243
      Location:1 → 386
      PLN02243; S-adenosylmethionine synthase
    Nucleotide Protein
    Heading Accession and Version

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