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    DDX11 DEAD/H-box helicase 11 [ Gallus gallus (chicken) ]

    Gene ID: 418144, updated on 3-Dec-2024

    Summary

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    Symbol
    DDX11provided by CGNC
    Full Name
    DEAD/H-box helicase 11provided by CGNC
    Primary source
    CGNC:50682
    See related
    Ensembl:ENSGALG00010012138
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    DDX12
    Orthologs
    human mouse all
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    Genomic context

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    See DDX11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (59960716..59991936)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (60288665..60319855)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene transmembrane and tetratricopeptide repeat containing 1 Neighboring gene uncharacterized LOC121109050 Neighboring gene ovochymase 1 Neighboring gene acrosin-binding protein like Neighboring gene ZFP2 zinc finger protein Neighboring gene WASH complex subunit 1 Neighboring gene IQ motif and Sec7 domain 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA duplex unwinding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleobase-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent DNA helicase DDX11; ATP-dependent DNA helicase DDX11
    Names
    DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
    DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)
    DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae)
    XP_024997212.2
    XP_024997215.2
    XP_024997218.2
    XP_040513832.1
    XP_040513833.1
    XP_040513834.1
    XP_040513835.1
    XP_040513836.1
    XP_040513837.1
    XP_040561332.1
    XP_040561339.1
    XP_046757273.1
    XP_046757277.1
    XP_046757278.1
    XP_046757279.1
    XP_046757287.1
    XP_046757291.1
    XP_046757292.1
    XP_046757296.1
    XP_046757300.1
    XP_046764697.1
    XP_046764698.1
    XP_046764699.1
    XP_046764700.1
    XP_046764701.1
    XP_046764702.1
    XP_046764703.1
    XP_046764704.1
    XP_046764705.1
    XP_416375.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      59960716..59991936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046901317.1 → XP_046757273.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    2. XM_046901335.1 → XP_046757291.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    3. XM_046901336.1 → XP_046757292.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    4. XM_046901323.1 → XP_046757279.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    5. XM_046901321.1 → XP_046757277.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    6. XM_046901331.1 → XP_046757287.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    7. XM_046901322.1 → XP_046757278.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    8. XM_046901340.1 → XP_046757296.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1

    9. XM_040705398.2 → XP_040561332.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0, A0A8V0YLC1
      Related
      ENSGALP00010016884.1, ENSGALT00010029127.1
      Conserved Domains (3) summary
      PTZ00121
      Location:72 → 341
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:229 → 897
      rad3; DNA repair helicase (rad3)
      cl30285
      Location:29 → 104
      Csf4_U; CRISPR/Cas system-associated DinG family helicase Csf4

    10. XM_416375.8 → XP_416375.5  ATP-dependent DNA helicase DDX11 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y861, A0A8V0YGK0
      Related
      ENSGALP00010016883.1, ENSGALT00010029125.1
      Conserved Domains (3) summary
      PTZ00121
      Location:70 → 339
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:227 → 895
      rad3; DNA repair helicase (rad3)
      cl30285
      Location:27 → 102
      Csf4_U; CRISPR/Cas system-associated DinG family helicase Csf4

    11. XM_046901344.1 → XP_046757300.1  ATP-dependent DNA helicase DDX11 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YGK0

    12. XM_025141444.3 → XP_024997212.2  ATP-dependent DNA helicase DDX11 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (2) summary
      PTZ00121
      Location:40 → 309
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:197 → 865
      rad3; DNA repair helicase (rad3)

    13. XM_040705405.2 → XP_040561339.1  ATP-dependent DNA helicase DDX11 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:124 → 792
      rad3; DNA repair helicase (rad3)

    14. XM_025141450.3 → XP_024997218.2  ATP-dependent DNA helicase DDX11 isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:68 → 736
      rad3; DNA repair helicase (rad3)

    15. XM_025141447.3 → XP_024997215.2  ATP-dependent DNA helicase DDX11 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:97 → 765
      rad3; DNA repair helicase (rad3)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      60288665..60319855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908741.1 → XP_046764697.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    2. XM_046908746.1 → XP_046764702.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    3. XM_046908747.1 → XP_046764703.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    4. XM_046908744.1 → XP_046764700.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    5. XM_046908742.1 → XP_046764698.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    6. XM_046908745.1 → XP_046764701.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    7. XM_046908743.1 → XP_046764699.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    8. XM_046908748.1 → XP_046764704.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0

    9. XM_040657898.2 → XP_040513832.1  ATP-dependent DNA helicase DDX11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YGK0
      Conserved Domains (3) summary
      PTZ00121
      Location:72 → 341
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:229 → 897
      rad3; DNA repair helicase (rad3)
      cl30285
      Location:29 → 70
      Csf4_U; CRISPR/Cas system-associated DinG family helicase Csf4

    10. XM_040657899.2 → XP_040513833.1  ATP-dependent DNA helicase DDX11 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YGK0
      Conserved Domains (3) summary
      PTZ00121
      Location:70 → 339
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:227 → 895
      rad3; DNA repair helicase (rad3)
      cl30285
      Location:27 → 68
      Csf4_U; CRISPR/Cas system-associated DinG family helicase Csf4

    11. XM_046908749.1 → XP_046764705.1  ATP-dependent DNA helicase DDX11 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YGK0

    12. XM_040657900.2 → XP_040513834.1  ATP-dependent DNA helicase DDX11 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (2) summary
      PTZ00121
      Location:40 → 309
      PTZ00121; MAEBL; Provisional
      TIGR00604
      Location:197 → 865
      rad3; DNA repair helicase (rad3)

    13. XM_040657901.1 → XP_040513835.1  ATP-dependent DNA helicase DDX11 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:124 → 792
      rad3; DNA repair helicase (rad3)

    14. XM_040657903.1 → XP_040513837.1  ATP-dependent DNA helicase DDX11 isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:68 → 736
      rad3; DNA repair helicase (rad3)

    15. XM_040657902.2 → XP_040513836.1  ATP-dependent DNA helicase DDX11 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y856
      Conserved Domains (1) summary
      TIGR00604
      Location:97 → 765
      rad3; DNA repair helicase (rad3)
    Nucleotide Protein Strain
    Heading Accession and Version

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