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    RBM43 RNA binding motif protein 43 [ Gallus gallus (chicken) ]

    Gene ID: 424313, updated on 3-Dec-2024

    Summary

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    Symbol
    RBM43provided by CGNC
    Full Name
    RNA binding motif protein 43provided by CGNC
    Primary source
    CGNC:9479
    See related
    Ensembl:ENSGALG00010009690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RBM43 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (34708548..34713730, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (34626072..34631184, complement)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053849 Neighboring gene Rho family GTPase 3 Neighboring gene N-myc and STAT interactor Neighboring gene TNF alpha induced protein 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      34708548..34713730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004943032.5 → XP_004943089.2  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6
      Conserved Domains (1) summary
      smart00360
      Location:12 → 85
      RRM; RNA recognition motif

    2. XM_046944177.1 → XP_046800133.1  RNA-binding protein 43 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XYM6

    3. XM_046944178.1 → XP_046800134.1  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6

    4. XM_422159.8 → XP_422159.5  RNA-binding protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XYM6, A0A8V0YBS2
      Related
      ENSGALP00010013392.1, ENSGALT00010023150.1
      Conserved Domains (1) summary
      smart00360
      Location:10 → 83
      RRM; RNA recognition motif

    5. XM_004943031.5 → XP_004943088.2  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6
      Conserved Domains (1) summary
      smart00360
      Location:12 → 85
      RRM; RNA recognition motif

    6. XM_015289869.4 → XP_015145355.2  RNA-binding protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XYM6, A0A8V0YBS2
      Related
      ENSGALP00010013388.1, ENSGALT00010023141.1
      Conserved Domains (1) summary
      smart00360
      Location:10 → 83
      RRM; RNA recognition motif

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      34626072..34631184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040677077.2 → XP_040533011.1  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6

    2. XM_046921712.1 → XP_046777668.1  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6

    3. XM_040677078.2 → XP_040533012.1  RNA-binding protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XYM6

    4. XM_040677075.2 → XP_040533009.1  RNA-binding protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XYM6

    5. XM_040677079.2 → XP_040533013.1  RNA-binding protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XYM6

    6. XM_040677074.2 → XP_040533008.1  RNA-binding protein 43 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XYM6
      Conserved Domains (1) summary
      smart00360
      Location:18 → 91
      RRM; RNA recognition motif
    Nucleotide Protein
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