NCOR1 nuclear receptor corepressor 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: NCOR1provided by CGNC
Full Name: nuclear receptor corepressor 1provided by CGNC
Primary source: CGNC:3303
See related: Ensembl:ENSGALG00010029731
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 50

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	19	NC_052550.1 (6950599..7006991, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	19	NC_052591.1 (6687666..6744031, complement)

Chromosome 19 - NC_052550.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Effects of dried natto diet on the transcript levels of the peroxisome proliferator-activated receptor-gamma, coactivator-1alpha and -1beta, and nuclear receptor corepressor 1 genes in laying hens.
Title: Effects of dried natto diet on the transcript levels of the peroxisome proliferator-activated receptor-γ, coactivator-1α and -1β, and nuclear receptor corepressor 1 genes in laying hens.

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Pathways from PubChem

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables nuclear thyroid hormone receptor binding	IEA Inferred from Electronic Annotation more info	PubMed
enables transcription corepressor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: nuclear receptor corepressor 1

Names: nuclear receptor co-repressor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

6950599..7006991 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040650459.2 → XP_040506393.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (2) summary

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:715 → 898

termin_org_DnaJ; terminal organelle assembly protein TopJ
XM_040650458.2 → XP_040506392.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Related

ENSGALP00010044611.1, ENSGALT00010071921.1

Conserved Domains (2) summary

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:715 → 898

termin_org_DnaJ; terminal organelle assembly protein TopJ
XM_004946657.5 → XP_004946714.2 nuclear receptor corepressor 1 isoform X4

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (2) summary

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:715 → 898

termin_org_DnaJ; terminal organelle assembly protein TopJ
XM_004946655.5 → XP_004946712.2 nuclear receptor corepressor 1 isoform X2

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (2) summary

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:715 → 898

termin_org_DnaJ; terminal organelle assembly protein TopJ
XM_004946656.5 → XP_004946713.2 nuclear receptor corepressor 1 isoform X3

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (2) summary

PRK08691
Location:688 → 852

PRK08691; DNA polymerase III subunits gamma and tau; Validated

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
XM_415843.8 → XP_415843.4 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Related

ENSGALP00010044612.1, ENSGALT00010071922.1

Conserved Domains (2) summary

cd00167
Location:632 → 675

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:715 → 898

termin_org_DnaJ; terminal organelle assembly protein TopJ
XM_046902620.1 → XP_046758576.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2
XM_004946661.4 → XP_004946718.2 nuclear receptor corepressor 1 isoform X5

Conserved Domains (2) summary

cd00167
Location:130 → 173

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

TIGR03835
Location:213 → 396

termin_org_DnaJ; terminal organelle assembly protein TopJ

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

6687666..6744031 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040687327.2 → XP_040543261.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_040687326.2 → XP_040543260.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_040687330.2 → XP_040543264.1 nuclear receptor corepressor 1 isoform X4

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_040687328.2 → XP_040543262.1 nuclear receptor corepressor 1 isoform X2

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_040687329.2 → XP_040543263.1 nuclear receptor corepressor 1 isoform X3

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_040687324.2 → XP_040543258.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2

Conserved Domains (4) summary

cd00167
Location:443 → 485

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:632 → 675

Myb_DNA-binding; Myb-like DNA-binding domain

pfam15784
Location:152 → 241

GPS2_interact; G-protein pathway suppressor 2-interacting domain

pfam16001
Location:703 → 908

DUF4775; Domain of unknown function (DUF4775)
XM_046930289.1 → XP_046786245.1 nuclear receptor corepressor 1 isoform X1

UniProtKB/TrEMBL

A0A8V1AKD2
XM_040687331.2 → XP_040543265.1 nuclear receptor corepressor 1 isoform X5

Conserved Domains (2) summary

pfam00249
Location:130 → 173

Myb_DNA-binding; Myb-like DNA-binding domain

pfam16001
Location:201 → 406

DUF4775; Domain of unknown function (DUF4775)