U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    RTKN2 rhotekin 2 [ Gallus gallus (chicken) ]

    Gene ID: 423660, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    RTKN2provided by CGNC
    Full Name
    rhotekin 2provided by CGNC
    Primary source
    CGNC:2154
    See related
    Ensembl:ENSGALG00010009484
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    PLEKHK1; rhotekin-2
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RTKN2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    44
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (8718841..8939117)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (8597703..8818224)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 1C Neighboring gene nuclear receptor binding factor 2 Neighboring gene uncharacterized LOC124418074 Neighboring gene uncharacterized LOC101748577 Neighboring gene 2-aminoethanethiol dioxygenase Neighboring gene uncharacterized LOC107053635 Neighboring gene zinc finger protein 365 Neighboring gene soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like Neighboring gene uncharacterized LOC112532727 Neighboring gene AT-rich interaction domain 5B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in hemopoiesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    rhotekin-2
    Names
    pleckstrin homology domain containing, family K member 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199597.2 → NP_001186526.2  rhotekin-2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000227
      UniProtKB/TrEMBL
      A0A8V0Y406

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8718841..8939117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040702369.2 → XP_040558303.1  rhotekin-2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y406, A0A8V0YAW1
      Related
      ENSGALP00010013074.1, ENSGALT00010022654.1
      Conserved Domains (2) summary
      cd13249
      Location:275 → 385
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:10 → 60
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    2. XM_046942830.1 → XP_046798786.1  rhotekin-2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y406, A0A8V0YAW1

    3. XM_046942828.1 → XP_046798784.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    4. XM_040702365.2 → XP_040558299.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:261 → 398
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:4 → 46
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    5. XM_046942827.1 → XP_046798783.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    6. XM_046942829.1 → XP_046798785.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    7. XM_040702367.2 → XP_040558301.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:261 → 398
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:4 → 46
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    8. XM_040702366.2 → XP_040558300.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:261 → 398
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:4 → 46
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    9. XM_025151519.3 → XP_025007287.2  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 421
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    10. XM_025151518.3 → XP_025007286.2  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 421
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    11. XM_015288109.4 → XP_015143595.2  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406
      Related
      ENSGALP00010013070.1, ENSGALT00010022650.1
      Conserved Domains (2) summary
      cd13249
      Location:284 → 394
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    12. XM_040702368.2 → XP_040558302.1  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 394
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    13. XM_046942832.1 → XP_046798788.1  rhotekin-2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y406

    14. XM_046942831.1 → XP_046798787.1  rhotekin-2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y406

    15. XM_025151517.3 → XP_025007285.2  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 421
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    16. XM_040702362.2 → XP_040558296.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 421
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    17. XM_025151543.3 → XP_025007311.2  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 394
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    18. XM_040702370.2 → XP_040558304.1  rhotekin-2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:217 → 354
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    19. XM_040702363.2 → XP_040558297.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406
      Conserved Domains (2) summary
      cd13249
      Location:284 → 421
      PH_rhotekin2; Anillin Pleckstrin homology (PH) domain
      cl00087
      Location:19 → 69
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

    RNA

    1. XR_006939531.1 RNA Sequence

    2. XR_006939532.1 RNA Sequence

    3. XR_006939533.1 RNA Sequence

    4. XR_006939534.1 RNA Sequence

    5. XR_005860616.2 RNA Sequence

    6. XR_005860615.2 RNA Sequence

    7. XR_005860617.2 RNA Sequence

    8. XR_006939530.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8597703..8818224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920096.1 → XP_046776052.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    2. XM_046920103.1 → XP_046776059.1  rhotekin-2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y406

    3. XM_046920104.1 → XP_046776060.1  rhotekin-2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y406

    4. XM_046920095.1 → XP_046776051.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    5. XM_046920094.1 → XP_046776050.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    6. XM_046920097.1 → XP_046776053.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    7. XM_046920099.1 → XP_046776055.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    8. XM_046920098.1 → XP_046776054.1  rhotekin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y406

    9. XM_046920089.1 → XP_046776045.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406

    10. XM_046920090.1 → XP_046776046.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406

    11. XM_046920093.1 → XP_046776049.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406

    12. XM_046920091.1 → XP_046776047.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406

    13. XM_046920092.1 → XP_046776048.1  rhotekin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y406

    14. XM_046920100.1 → XP_046776056.1  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406

    15. XM_046920102.1 → XP_046776058.1  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406

    16. XM_046920101.1 → XP_046776057.1  rhotekin-2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y406

    17. XM_046920105.1 → XP_046776061.1  rhotekin-2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y406

    18. XM_046920107.1 → XP_046776063.1  rhotekin-2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y406

    19. XM_046920106.1 → XP_046776062.1  rhotekin-2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Y406

    RNA

    1. XR_006934996.1 RNA Sequence

    2. XR_006934997.1 RNA Sequence

    3. XR_006934998.1 RNA Sequence

    4. XR_006934999.1 RNA Sequence

    5. XR_006935000.1 RNA Sequence

    6. XR_006934994.1 RNA Sequence

    7. XR_006934993.1 RNA Sequence

    8. XR_006934995.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.