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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047132.2 RefSeqGene
- Range
-
18153..35446
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001288727.2 → NP_001275656.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two exons in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1.
- Source sequence(s)
-
AB011167, BU742486, HY023373
- Consensus CDS
-
CCDS73186.1
- UniProtKB/TrEMBL
- B4DSS0, E7EVG6
- Related
- ENSP00000399743.2, ENST00000413464.6
- Conserved Domains (1) summary
-
- cd12624
Location:1277 → 1367
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
-
NM_001288728.2 → NP_001275657.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform 3
See identical proteins and their annotated locations for NP_001275657.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' coding region and initiates translation at an alternate start codon, which leads to a frameshift, compared to variant 1. The encoded isoform (3) has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AB011167, AF325193, BC063806, BU742486, HY023373
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (1) summary
-
- cd12624
Location:1419 → 1509
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
-
NM_015062.5 → NP_055877.3 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform 1
See identical proteins and their annotated locations for NP_055877.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AB011167, BU742486, HY023373
- Consensus CDS
-
CCDS7529.1
- UniProtKB/Swiss-Prot
- Q5VV66, Q5VV67, Q6P3U5, Q6P3W1, Q76N31, Q9BUJ3, Q9BZE5, Q9Y4E0
- UniProtKB/TrEMBL
-
B4DSS0
- Related
- ENSP00000278070.2, ENST00000278070.7
- Conserved Domains (1) summary
-
- cd12624
Location:1541 → 1631
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
102119889..102150333
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047424879.1 → XP_047280835.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_024447914.2 → XP_024303682.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (2) summary
-
- cd12624
Location:1462 → 1552
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
- cl26464
Location:531 → 1123
- Atrophin-1; Atrophin-1 family
-
XM_047424878.1 → XP_047280834.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_024447917.2 → XP_024303685.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (2) summary
-
- cd12624
Location:1462 → 1552
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
- cl26464
Location:531 → 1123
- Atrophin-1; Atrophin-1 family
-
XM_024447915.2 → XP_024303683.2 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424885.1 → XP_047280841.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X13
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_017015982.2 → XP_016871471.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X2
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_017015984.2 → XP_016871473.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X14
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_011539549.3 → XP_011537851.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X3
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (1) summary
-
- cd12624
Location:1498 → 1588
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
-
XM_047424876.1 → XP_047280832.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X4
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_017015983.2 → XP_016871472.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X5
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424877.1 → XP_047280833.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X6
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_011539551.3 → XP_011537853.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X8
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (1) summary
-
- cd12624
Location:1458 → 1548
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
-
XM_047424880.1 → XP_047280836.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X9
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424886.1 → XP_047280842.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X15
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424881.1 → XP_047280837.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X10
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424882.1 → XP_047280838.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X11
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_047424887.1 → XP_047280843.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X16
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_006717731.4 → XP_006717794.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X17
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (1) summary
-
- PHA03247
Location:610 → 1136
- PHA03247; large tegument protein UL36; Provisional
-
XM_047424884.1 → XP_047280840.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X12
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_024447916.2 → XP_024303684.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
- Conserved Domains (2) summary
-
- cd12624
Location:1462 → 1552
- RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
- cl26464
Location:531 → 1123
- Atrophin-1; Atrophin-1 family
-
XM_047424883.1 → XP_047280839.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X12
- UniProtKB/TrEMBL
-
B4DSS0
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
103005469..103035313
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054365301.1 → XP_054221276.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365303.1 → XP_054221278.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365302.1 → XP_054221277.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365304.1 → XP_054221279.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365295.1 → XP_054221270.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365312.1 → XP_054221287.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X13
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365296.1 → XP_054221271.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X2
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365313.1 → XP_054221288.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X14
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365297.1 → XP_054221272.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X3
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365298.1 → XP_054221273.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X4
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365299.1 → XP_054221274.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X5
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365300.1 → XP_054221275.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X6
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365305.1 → XP_054221280.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X8
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365306.1 → XP_054221281.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X9
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365314.1 → XP_054221289.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X15
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365307.1 → XP_054221282.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X10
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365308.1 → XP_054221283.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X11
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365315.1 → XP_054221290.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X16
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365316.1 → XP_054221291.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X17
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365310.1 → XP_054221285.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X12
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365311.1 → XP_054221286.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X7
- UniProtKB/TrEMBL
-
B4DSS0
-
XM_054365309.1 → XP_054221284.1 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X12
- UniProtKB/TrEMBL
-
B4DSS0