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    LOC105370275 uncharacterized LOC105370275 [ Homo sapiens (human) ]

    Gene ID: 105370275, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105370275
    Gene description
    uncharacterized LOC105370275
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370275 in Genome Data Viewer
    Location:
    13q31.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (80121791..80166394, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (79349816..79394423, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 382 Neighboring gene uncharacterized LOC124903273 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:80510429-80511628 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:80540344-80541018 Neighboring gene long intergenic non-protein coding RNA 1080 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7859 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:80707181-80707680 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:80721652-80721755 Neighboring gene Sharpr-MPRA regulatory region 9192 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:80763580-80764573 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:80766325-80767524 Neighboring gene uncharacterized LOC101927238 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:80792397-80792897 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7860 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5428 Neighboring gene sprouty RTK signaling antagonist 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      80121791..80166394 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_942116.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      79349816..79394423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007083783.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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