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    LOC126758919 sex-lethal homolog [ Bactrocera neohumeralis ]

    Gene ID: 126758919, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC126758919
    Gene description
    sex-lethal homolog
    See related
    EnsemblRapid:LOC126758919
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bactrocera neohumeralis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC126758919 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current APGP_CSIRO_Bneo_wtdbg2-racon-allhic-juicebox.fasta_v2 (GCF_024586455.1) 5 NC_065922.1 (74935675..74998774, complement)

    Chromosome 5 - NC_065922.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4d1-like Neighboring gene uncharacterized LOC126758922 Neighboring gene Cytochrome P450 4d1 Neighboring gene gram-negative bacteria-binding protein 3-like Neighboring gene gram-negative bacteria-binding protein 3-like Neighboring gene cytochrome P450 4d2-like Neighboring gene Cytochrome P450 4ae1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_065922.1 Chromosome 5 Reference APGP_CSIRO_Bneo_wtdbg2-racon-allhic-juicebox.fasta_v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sex determination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sex-lethal homolog

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Bactrocera neohumeralis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference APGP_CSIRO_Bneo_wtdbg2-racon-allhic-juicebox.fasta_v2 Primary Assembly

    Genomic

    1. NC_065922.1 Reference APGP_CSIRO_Bneo_wtdbg2-racon-allhic-juicebox.fasta_v2 Primary Assembly

      Range
      74935675..74998774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_050473371.1 → XP_050329328.1  sex-lethal homolog isoform X5

      Related
      XP_050329328.1, XM_050473371.1

    2. XM_050473367.1 → XP_050329324.1  sex-lethal homolog isoform X1

      Related
      XP_050329324.1, XM_050473367.1

    3. XM_050473372.1 → XP_050329329.1  sex-lethal homolog isoform X6

      Related
      XP_050329329.1, XM_050473372.1

    4. XM_050473369.1 → XP_050329326.1  sex-lethal homolog isoform X3

      Related
      XP_050329326.1, XM_050473369.1

    5. XM_050473368.1 → XP_050329325.1  sex-lethal homolog isoform X2

      Related
      XP_050329325.1, XM_050473368.1

    6. XM_050473370.1 → XP_050329327.1  sex-lethal homolog isoform X4

      Related
      XP_050329327.1, XM_050473370.1
    Nucleotide Protein
    Heading Accession and Version

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