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    BBOV_IV002550 DNA repair endonuclease family protein [ Babesia bovis T2Bo ]

    Gene ID: 5477639, updated on 17-May-2024

    Summary

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    Gene symbol
    BBOV_IV002550
    Gene description
    DNA repair endonuclease family protein
    Locus tag
    BBOV_IV002550
    See related
    PiroplasmaDB:BBOV_IV002550; VEuPathDB:BBOV_IV002550
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Babesia bovis T2Bo (strain: T2Bo)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia
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    Genomic context

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    See BBOV_IV002550 in Genome Data Viewer
    Location:
    chromosome: 4, map: unlocalized
    Exon count:
    3

    NW_026261572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DEAH box RNA helicase family protein Neighboring gene NUC173 domain family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026261572.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome dataset of Babesia bovis life stages within vertebrate and invertebrate hosts. Ueti MW, et al. Data Brief, 2020 Dec. PMID 33294524, Free PMC Article
    2. Comparative analysis of gene expression between Babesia bovis blood stages and kinetes allowed by improved genome annotation. Ueti MW, et al. Int J Parasitol, 2021 Feb. PMID 33069745
    3. Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa. Brayton KA, et al. PLoS Pathog, 2007 Oct 19. PMID 17953480, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA endodeoxyribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair involved in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in resolution of meiotic recombination intermediates IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleotide-excision repair factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair endonuclease family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_026261572.1 Reference assembly

      Range
      572868..576584
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001609370.2 → XP_001609420.1  DNA repair endonuclease family protein [Babesia bovis T2Bo]

      See identical proteins and their annotated locations for XP_001609420.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A7AVM6
      Conserved Domains (2) summary
      TIGR00596
      Location:217 → 1155
      rad1; DNA repair protein (rad1)
      pfam02732
      Location:928 → 1054
      ERCC4; ERCC4 domain
    Nucleotide Protein
    Heading Accession and Version

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