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    BBOV_IV003240 haloacid dehalogenase-like hydrolase family protein [ Babesia bovis T2Bo ]

    Gene ID: 5477707, updated on 10-Oct-2024

    Summary

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    Gene symbol
    BBOV_IV003240
    Gene description
    haloacid dehalogenase-like hydrolase family protein
    Locus tag
    BBOV_IV003240
    See related
    PiroplasmaDB:BBOV_IV003240; VEuPathDB:BBOV_IV003240
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Babesia bovis T2Bo (strain: T2Bo)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia
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    Genomic context

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    See BBOV_IV003240 in Genome Data Viewer
    Location:
    chromosome: 4, map: unlocalized
    Exon count:
    3

    NW_026261572.1Genomic Context describing neighboring genes Neighboring gene haloacid dehalogenase-like hydrolase family protein Neighboring gene haloacid dehalogenase-like hydrolase family protein Neighboring gene uncharacterized protein Neighboring gene putative integral membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026261572.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome dataset of Babesia bovis life stages within vertebrate and invertebrate hosts. Ueti MW, et al. Data Brief, 2020 Dec. PMID 33294524, Free PMC Article
    2. Comparative analysis of gene expression between Babesia bovis blood stages and kinetes allowed by improved genome annotation. Ueti MW, et al. Int J Parasitol, 2021 Feb. PMID 33069745
    3. Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa. Brayton KA, et al. PLoS Pathog, 2007 Oct 19. PMID 17953480, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    haloacid dehalogenase-like hydrolase family protein
    XP_001609488.1
    • encoded by transcript variant A - alternatively spliced
    XP_051623622.1
    • encoded by transcript variant B - alternatively spliced

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_026261572.1 Reference assembly

      Range
      725611..726840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051767917.1 → XP_051623622.1  haloacid dehalogenase-like hydrolase family protein [Babesia bovis T2Bo]

      Status: PROVISIONAL

    2. XM_001609438.2 → XP_001609488.1  haloacid dehalogenase-like hydrolase family protein [Babesia bovis T2Bo]

      See identical proteins and their annotated locations for XP_001609488.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A7AVU4, S6C977
      Conserved Domains (2) summary
      COG0561
      Location:38 → 300
      Cof; Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases [Coenzyme transport and metabolism, General function prediction only]
      cl21460
      Location:188 → 303
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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