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    LOC100169149 uncharacterized protein CG1161-like [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100169149, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC100169149
    Gene description
    uncharacterized protein CG1161-like
    See related
    APHIDBASE:ACYPI009793; EnsemblRapid:LOC100169149
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC100169149 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (68125384..68136226, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383606.1 (555771..566585)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta type-4-like Neighboring gene uncharacterized LOC107882958 Neighboring gene uncharacterized LOC103308527 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene b(0,+)-type amino acid transporter 1 Neighboring gene peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100169149
    Names
    ACYPI009793

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001246135.1 → NP_001233064.1  uncharacterized protein LOC100169149 precursor

      See identical proteins and their annotated locations for NP_001233064.1

      Status: PREDICTED

      Source sequence(s)
      AK340229
      UniProtKB/TrEMBL
      C4WSK7, J9KA15
      Related
      NP_001233064.1, NM_001246135.1
      Conserved Domains (1) summary
      pfam05434
      Location:44 → 188
      Tmemb_9; TMEM9

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      68125384..68136226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008182021.3 → XP_008180243.1  uncharacterized protein LOC100169149 isoform X2

      See identical proteins and their annotated locations for XP_008180243.1

      UniProtKB/TrEMBL
      A0A8R1WZ61
      Related
      XP_008180243.1, XM_008182021.3
      Conserved Domains (1) summary
      pfam05434
      Location:6 → 165
      Tmemb_9; TMEM9

    2. XM_008182020.3 → XP_008180242.1  uncharacterized protein LOC100169149 isoform X2

      See identical proteins and their annotated locations for XP_008180242.1

      UniProtKB/TrEMBL
      A0A8R1WZ61
      Related
      XP_008180242.1, XM_008182020.3
      Conserved Domains (1) summary
      pfam05434
      Location:6 → 165
      Tmemb_9; TMEM9

    3. XM_008182019.3 → XP_008180241.1  uncharacterized protein LOC100169149 isoform X1

      UniProtKB/TrEMBL
      A0A8R1WYZ3
      Related
      XP_008180241.1, XM_008182019.3
      Conserved Domains (1) summary
      pfam05434
      Location:44 → 203
      Tmemb_9; TMEM9
    Nucleotide Protein
    Heading Accession and Version

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