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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001142674.2 → NP_001136146.1 chitinase domain-containing protein 1 isoform a precursor
See identical proteins and their annotated locations for NP_001136146.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AP006623, BC000001, BI818660, CK904484
- Consensus CDS
-
CCDS7722.1
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
- Related
- ENSP00000388156.2, ENST00000436108.6
- Conserved Domains (1) summary
-
- cd02876
Location:77 → 393
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
-
NM_001142675.2 → NP_001136147.1 chitinase domain-containing protein 1 isoform a precursor
See identical proteins and their annotated locations for NP_001136147.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AP006623, BC095409, BI821281, CK904484, DA983719
- Consensus CDS
-
CCDS7722.1
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
- Related
- ENSP00000391255.1, ENST00000449825.5
- Conserved Domains (1) summary
-
- cd02876
Location:77 → 393
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
-
NM_001142676.2 → NP_001136148.1 chitinase domain-containing protein 1 isoform b precursor
See identical proteins and their annotated locations for NP_001136148.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and contains an alternate in-frame exon in the 5' coding region, compared to variant 1. The resulting isoform (b) has the same N- and C-termini but includes an additional segment, compared to isoform a.
- Source sequence(s)
-
AK075413, AP006623, CK904484
- Consensus CDS
-
CCDS44511.1
- UniProtKB/TrEMBL
-
B7Z705
- Related
- ENSP00000435503.1, ENST00000528581.5
- Conserved Domains (2) summary
-
- cd02876
Location:102 → 418
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:106 → 409
- Glyco_18; Glyco_18 domain
-
NM_001142677.2 → NP_001136149.1 chitinase domain-containing protein 1 isoform c precursor
See identical proteins and their annotated locations for NP_001136149.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter than isoform a.
- Source sequence(s)
-
AP006623, AY037151, CK904484
- Consensus CDS
-
CCDS44510.1
- UniProtKB/TrEMBL
-
B7Z705
- Related
- ENSP00000416034.2, ENST00000429789.6
- Conserved Domains (2) summary
-
- cd02876
Location:77 → 362
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:81 → 353
- Glyco_18; Glyco_18 domain
-
NM_023947.4 → NP_076436.3 chitinase domain-containing protein 1 isoform a precursor
See identical proteins and their annotated locations for NP_076436.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 encode isoform a.
- Source sequence(s)
-
AP006623, BC095409, CK904484
- Consensus CDS
-
CCDS7722.1
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
- Related
- ENSP00000325055.8, ENST00000323578.13
- Conserved Domains (1) summary
-
- cd02876
Location:77 → 393
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
867859..915214 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011520300.3 → XP_011518602.1 chitinase domain-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
B7Z705
- Conserved Domains (2) summary
-
- cd02876
Location:162 → 447
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:166 → 438
- Glyco_18; Glyco_18 domain
-
XM_011520299.3 → XP_011518601.1 chitinase domain-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
B7Z705
- Conserved Domains (2) summary
-
- cd02876
Location:162 → 478
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:166 → 469
- Glyco_18; Glyco_18 domain
-
XM_047427479.1 → XP_047283435.1 chitinase domain-containing protein 1 isoform X5
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
-
XM_047427480.1 → XP_047283436.1 chitinase domain-containing protein 1 isoform X5
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
-
XM_047427484.1 → XP_047283440.1 chitinase domain-containing protein 1 isoform X8
- UniProtKB/TrEMBL
-
B7Z705
-
XM_047427481.1 → XP_047283437.1 chitinase domain-containing protein 1 isoform X5
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
-
XM_017018166.2 → XP_016873655.1 chitinase domain-containing protein 1 isoform X5
- UniProtKB/Swiss-Prot
- B3KWB0, Q8NBM9, Q96CZ3, Q96S93, Q96SK0, Q9BWS9, Q9BY52
- UniProtKB/TrEMBL
-
B7Z705
- Conserved Domains (1) summary
-
- cd02876
Location:77 → 393
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
-
XM_011520301.4 → XP_011518603.1 chitinase domain-containing protein 1 isoform X3
- Conserved Domains (2) summary
-
- cd02876
Location:162 → 405
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:166 → 397
- Glyco_18; Glyco_18 domain
-
XM_047427485.1 → XP_047283441.1 chitinase domain-containing protein 1 isoform X9
-
XM_024448663.2 → XP_024304431.1 chitinase domain-containing protein 1 isoform X7
- Conserved Domains (1) summary
-
- cd02876
Location:77 → 320
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
-
XM_047427482.1 → XP_047283438.1 chitinase domain-containing protein 1 isoform X6
-
XM_011520302.4 → XP_011518604.1 chitinase domain-containing protein 1 isoform X4
- Conserved Domains (2) summary
-
- cd02876
Location:162 → 404
- GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
- smart00636
Location:166 → 397
- Glyco_18; Glyco_18 domain
-
XM_047427483.1 → XP_047283439.1 chitinase domain-containing protein 1 isoform X10
-
XM_047427486.1 → XP_047283442.1 chitinase domain-containing protein 1 isoform X11
-
XM_017018167.3 → XP_016873656.1 chitinase domain-containing protein 1 isoform X10
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
919274..966273 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054369731.1 → XP_054225706.1 chitinase domain-containing protein 1 isoform X8
- UniProtKB/TrEMBL
-
B7Z705
-
XM_054369728.1 → XP_054225703.1 chitinase domain-containing protein 1 isoform X5
- UniProtKB/TrEMBL
-
B7Z705
-
XM_054369725.1 → XP_054225700.1 chitinase domain-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
B7Z705
-
XM_054369724.1 → XP_054225699.1 chitinase domain-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
B7Z705
-
XM_054369726.1 → XP_054225701.1 chitinase domain-containing protein 1 isoform X3
-
XM_054369732.1 → XP_054225707.1 chitinase domain-containing protein 1 isoform X9
-
XM_054369730.1 → XP_054225705.1 chitinase domain-containing protein 1 isoform X7
-
XM_054369734.1 → XP_054225709.1 chitinase domain-containing protein 1 isoform X10
-
XM_054369729.1 → XP_054225704.1 chitinase domain-containing protein 1 isoform X6
-
XM_054369727.1 → XP_054225702.1 chitinase domain-containing protein 1 isoform X4
-
XM_054369735.1 → XP_054225710.1 chitinase domain-containing protein 1 isoform X11
-
XM_054369733.1 → XP_054225708.1 chitinase domain-containing protein 1 isoform X10