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    SGCG sarcoglycan gamma [ Talpa occidentalis (Iberian mole) ]

    Gene ID: 119258767, updated on 21-Mar-2024

    Summary

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    Gene symbol
    SGCG
    Gene description
    sarcoglycan gamma
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Talpa occidentalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa
    Orthologs
    human mouse all
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    Genomic context

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    See SGCG in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_03 current MPIMG_talOcc4v2.1 (GCF_014898055.3) Unplaced Scaffold NW_023604861.1 (43311085..43348586)

    NW_023604861.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase B2 Neighboring gene lymphocyte cytosolic protein 1 Neighboring gene leucine rich repeat containing 63 Neighboring gene sacsin molecular chaperone Neighboring gene TNF receptor superfamily member 19

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023604861 Unplaced Scaffold Reference MPIMG_talOcc4v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cardiac muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-sarcoglycan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_014898055.3-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MPIMG_talOcc4v2.1 Primary Assembly

    Genomic

    1. NW_023604861.1 Reference MPIMG_talOcc4v2.1 Primary Assembly

      Range
      43311085..43348586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037527020.1 → XP_037382917.1  gamma-sarcoglycan isoform X2

      Conserved Domains (1) summary
      pfam04790
      Location:25 → 278
      Sarcoglycan_1; Sarcoglycan complex subunit protein

    2. XM_054687790.1 → XP_054543765.1  gamma-sarcoglycan isoform X2

    3. XM_037527021.2 → XP_037382918.2  gamma-sarcoglycan isoform X1

    Nucleotide Protein
    Heading Accession and Version

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