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    Mpl myeloproliferative leukemia virus oncogene [ Mus musculus (house mouse) ]

    Gene ID: 17480, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mplprovided by MGI
    Official Full Name
    myeloproliferative leukemia virus oncogeneprovided by MGI
    Primary source
    MGI:MGI:97076
    See related
    Ensembl:ENSMUSG00000006389 AllianceGenome:MGI:97076
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CD110; TPO-R; c-mpl; hlb219
    Summary
    Predicted to enable thrombopoietin receptor activity. Involved in thrombopoietin-mediated signaling pathway. Acts upstream of or within several processes, including hemopoiesis; regulation of gene expression; and regulation of stem cell division. Predicted to be located in several cellular components, including Golgi apparatus; neuronal cell body; and nuclear membrane. Predicted to be active in external side of plasma membrane. Is expressed in several structures, including brain; hemolymphoid system; mesenchyme derived from splanchnopleure; spinal cord; and vestibulo-cochlear ganglion. Used to study congenital amegakaryocytic thrombocytopenia. Human ortholog(s) of this gene implicated in essential thrombocythemia; myelofibrosis; thrombocytopenia; and thrombocytosis. Orthologous to human MPL (MPL proto-oncogene, thrombopoietin receptor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in spleen adult (RPKM 4.4), liver E14.5 (RPKM 3.8) and 7 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mpl in Genome Data Viewer
    Location:
    4 D2.1; 4 54.61 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118299609..118314771, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118442412..118457688, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1281 Neighboring gene mediator complex subunit 8 Neighboring gene ELOVL fatty acid elongase 1 Neighboring gene STARR-positive B cell enhancer ABC_E6202 Neighboring gene cell division cycle 20 Neighboring gene tyrosine kinase with immunoglobulin-like and EGF-like domains 1 Neighboring gene predicted gene 12859

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 
    • Endonuclease-mediated (5) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables thrombopoietin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thrombopoietin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables thrombopoietin receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in basophil homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within definitive hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in eosinophil homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within homeostasis of number of cells IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in monocyte homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neutrophil homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within platelet formation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of lymphocyte proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of platelet formation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of chemokine production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of stem cell division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within regulation of stem cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in thrombopoietin-mediated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in thrombopoietin-mediated signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi apparatus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    thrombopoietin receptor
    Names
    myeloproliferative leukemia protein
    proto-oncogene c-Mpl

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122949.3NP_001116421.1  thrombopoietin receptor isoform 1 precursor

      See identical proteins and their annotated locations for NP_001116421.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1, also known as c-mpl-I).
      Source sequence(s)
      AL627212
      Consensus CDS
      CCDS51284.1
      UniProtKB/TrEMBL
      A2A9D4, Q3ZB68
      Related
      ENSMUSP00000006556.5, ENSMUST00000006556.11
      Conserved Domains (2) summary
      cd00063
      Location:395484
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam09067
      Location:25128
      EpoR_lig-bind; Erythropoietin receptor, ligand binding
    2. NM_001285496.2NP_001272425.1  thrombopoietin receptor isoform 3 precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (3, also known as c-mpl-II) that is shorter than isoform 1.
      Source sequence(s)
      AL627212
      UniProtKB/TrEMBL
      Q925F5
      Related
      ENSMUSP00000101983.2, ENSMUST00000106375.2
      Conserved Domains (2) summary
      cd00063
      Location:335424
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam09067
      Location:25128
      EpoR_lig-bind; Erythropoietin receptor, ligand binding
    3. NM_001285497.2NP_001272426.1  thrombopoietin receptor isoform 4 precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks two alternate exons, which results in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (4) has a distinct C-terminus and is shorter than isoform 1.
      Source sequence(s)
      AL627212
      UniProtKB/TrEMBL
      E9Q7U5
      Related
      ENSMUSP00000130167.3, ENSMUST00000168404.9
      Conserved Domains (1) summary
      pfam09067
      Location:25128
      EpoR_lig-bind; Erythropoietin receptor, ligand binding
    4. NM_010823.4NP_034953.2  thrombopoietin receptor isoform 2 precursor

      See identical proteins and their annotated locations for NP_034953.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (2) that is shorter than isoform 1.
      Source sequence(s)
      AL627212
      Consensus CDS
      CCDS18552.1
      UniProtKB/Swiss-Prot
      A6H8H6, Q08351, Q8BRX0
      UniProtKB/TrEMBL
      Q3ZB69
      Related
      ENSMUSP00000099732.4, ENSMUST00000102671.10
      Conserved Domains (2) summary
      cd00063
      Location:387476
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam09067
      Location:25128
      EpoR_lig-bind; Erythropoietin receptor, ligand binding

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      118299609..118314771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011240468.3XP_011238770.1  thrombopoietin receptor isoform X1

      Conserved Domains (1) summary
      cd00063
      Location:114203
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    RNA

    1. XR_004941829.1 RNA Sequence