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    paired amphipathic helix Sin3-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837564, updated on 18-Sep-2024

    Summary

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    Official Full Name
    paired amphipathic helix Sin3-like protein
    Primary source
    TAIR:AT1G10250
    Locus tag
    AT1G10250
    See related
    Araport:AT1G10250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14N23.13; F14N23_13
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (3360087..3360508, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein Neighboring gene FAR1-related sequence 11 Neighboring gene pseudo Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    paired amphipathic helix Sin3-like protein
    NP_172496.1
    • BEST Arabidopsis thaliana protein match is: SIN3-like 6 (TAIR:AT1G10450.1); Has 310 Blast hits to 310 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 174; Fungi - 23; Plants - 97; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3360087..3360508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100899.1 → NP_172496.1  paired amphipathic helix Sin3-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172496.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EAF7, Q9SY67
      Conserved Domains (1) summary
      pfam16879
      Location:1 → 70
      Sin3a_C; C-terminal domain of Sin3a protein
    Nucleotide Protein
    Heading Accession and Version

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