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    LOC100267152 acetate--CoA ligase CCL3 [ Vitis vinifera (wine grape) ]

    Gene ID: 100267152, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100267152
    Gene description
    acetate--CoA ligase CCL3
    Locus tag
    VIT_00035030001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100267152 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 5 NC_081809.1 (898332..903531, complement)
    102 previous assembly 12X (GCF_000003745.3) 5 NC_012011.3 (1020773..1025879)

    Chromosome 5 - NC_081809.1Genomic Context describing neighboring genes Neighboring gene putative beta-D-xylosidase Neighboring gene acetate--CoA ligase CCL3 Neighboring gene chitinase-like protein 2 Neighboring gene calmodulin-binding transcription activator 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    acetate--CoA ligase CCL3
    Names
    acetate/butyrate--CoA ligase AAE7, peroxisomal
    medium-chain-fatty-acid--CoA ligase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081809.1 Reference ASM3070453v1 Primary Assembly

      Range
      898332..903531 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002276497.4 → XP_002276533.1  acetate--CoA ligase CCL3

      UniProtKB/TrEMBL
      A5B265
      Conserved Domains (2) summary
      PLN02479
      Location:1 → 567
      PLN02479; acetate-CoA ligase
      cd12118
      Location:17 → 554
      ttLC_FACS_AEE21_like; Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis
    Nucleotide Protein
    Heading Accession and Version

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