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    UBAP2L ubiquitin associated protein 2 like [ Bos taurus (domestic cattle) ]

    Gene ID: 100125221, updated on 30-Jan-2025

    Summary

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    Official Symbol
    UBAP2Lprovided by VGNC
    Official Full Name
    ubiquitin associated protein 2 likeprovided by VGNC
    Primary source
    VGNC:VGNC:36573
    See related
    BGD:BT24813; EnsemblRapid:ENSBTAG00070014301
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
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    Genomic context

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    See UBAP2L in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (16253211..16324843, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene aquaporin 10 Neighboring gene small nucleolar RNA SNORA58 Neighboring gene HCLS1 associated protein X-1 Neighboring gene microRNA mir-2411 Neighboring gene chromosome 3 C1orf43 homolog Neighboring gene cilia and flagella associated protein 141 Neighboring gene microRNA mir-190b Neighboring gene tropomyosin 3 Neighboring gene nucleoporin 210 like Neighboring gene ADP ribosylation factor 1 pseudogene Neighboring gene cytochrome b-c1 complex subunit 10-like Neighboring gene ferritin light chain-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC152087

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hematopoietic stem cell homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-associated protein 2-like

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103107.1 → NP_001096577.1  ubiquitin-associated protein 2-like

      See identical proteins and their annotated locations for NP_001096577.1

      Status: PROVISIONAL

      Source sequence(s)
      BT029792
      UniProtKB/TrEMBL
      A1L505, F6PRN0
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16253211..16324843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010802864.4 → XP_010801166.1  ubiquitin-associated protein 2-like isoform X22

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    2. XM_059881104.1 → XP_059737087.1  ubiquitin-associated protein 2-like isoform X18

      UniProtKB/TrEMBL
      A0AAA9TFY7

    3. XM_024984133.2 → XP_024839901.1  ubiquitin-associated protein 2-like isoform X21

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    4. XM_059881101.1 → XP_059737084.1  ubiquitin-associated protein 2-like isoform X17

      UniProtKB/TrEMBL
      A0AAA9TFY7

    5. XM_010802858.4 → XP_010801160.1  ubiquitin-associated protein 2-like isoform X9

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:516 → 543
      DUF3697; Ubiquitin-associated protein 2

    6. XM_010802863.4 → XP_010801165.1  ubiquitin-associated protein 2-like isoform X20

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:507 → 534
      DUF3697; Ubiquitin-associated protein 2

    7. XM_024984120.2 → XP_024839888.1  ubiquitin-associated protein 2-like isoform X19

      UniProtKB/TrEMBL
      A0AAA9SHA6, F6RGC1
      Related
      ENSBTAP00070019009.1, ENSBTAT00070032420.1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:507 → 534
      DUF3697; Ubiquitin-associated protein 2

    8. XM_010802861.4 → XP_010801163.1  ubiquitin-associated protein 2-like isoform X12

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    9. XM_010802855.4 → XP_010801157.1  ubiquitin-associated protein 2-like isoform X6

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    10. XM_059881040.1 → XP_059737023.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7

    11. XM_059881038.1 → XP_059737021.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7

    12. XM_059881039.1 → XP_059737022.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7

    13. XM_024984119.2 → XP_024839887.1  ubiquitin-associated protein 2-like isoform X15

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    14. XM_059881081.1 → XP_059737064.1  ubiquitin-associated protein 2-like isoform X10

      UniProtKB/TrEMBL
      A0AAA9SAX1, A0AAA9TFY7

    15. XM_010802850.4 → XP_010801152.1  ubiquitin-associated protein 2-like isoform X1

      See identical proteins and their annotated locations for XP_010801152.1

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    16. XM_059881052.1 → XP_059737035.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7

    17. XM_024984046.2 → XP_024839814.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    18. XM_024984117.2 → XP_024839885.1  ubiquitin-associated protein 2-like isoform X15

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    19. XM_024984089.2 → XP_024839857.1  ubiquitin-associated protein 2-like isoform X10

      UniProtKB/TrEMBL
      A0AAA9SAX1, A0AAA9TFY7
      Related
      ENSBTAP00070018993.1, ENSBTAT00070032399.1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    20. XM_010802849.4 → XP_010801151.1  ubiquitin-associated protein 2-like isoform X1

      See identical proteins and their annotated locations for XP_010801151.1

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    21. XM_059881099.1 → XP_059737082.1  ubiquitin-associated protein 2-like isoform X16

      UniProtKB/TrEMBL
      F6RGC1

    22. XM_024984094.2 → XP_024839862.1  ubiquitin-associated protein 2-like isoform X11

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    23. XM_010802862.4 → XP_010801164.1  ubiquitin-associated protein 2-like isoform X15

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    24. XM_010802859.4 → XP_010801161.1  ubiquitin-associated protein 2-like isoform X10

      UniProtKB/TrEMBL
      A0AAA9SAX1, A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    25. XM_010802857.4 → XP_010801159.1  ubiquitin-associated protein 2-like isoform X8

      UniProtKB/TrEMBL
      A0AAA9SAU9, F6RGC1
      Related
      ENSBTAP00070018986.1, ENSBTAT00070032391.1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:516 → 543
      DUF3697; Ubiquitin-associated protein 2

    26. XM_010802852.4 → XP_010801154.1  ubiquitin-associated protein 2-like isoform X3

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:516 → 543
      DUF3697; Ubiquitin-associated protein 2

    27. XM_059881091.1 → XP_059737074.1  ubiquitin-associated protein 2-like isoform X14

      UniProtKB/TrEMBL
      F6RGC1

    28. XM_024984098.2 → XP_024839866.1  ubiquitin-associated protein 2-like isoform X13

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:507 → 534
      DUF3697; Ubiquitin-associated protein 2

    29. XM_010802856.4 → XP_010801158.1  ubiquitin-associated protein 2-like isoform X7

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:507 → 534
      DUF3697; Ubiquitin-associated protein 2

    30. XM_010802854.4 → XP_010801156.1  ubiquitin-associated protein 2-like isoform X5

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    31. XM_010802851.4 → XP_010801153.1  ubiquitin-associated protein 2-like isoform X2

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    32. XM_010802853.4 → XP_010801155.1  ubiquitin-associated protein 2-like isoform X4

      UniProtKB/TrEMBL
      F6RGC1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    33. XM_010802848.4 → XP_010801150.1  ubiquitin-associated protein 2-like isoform X1

      See identical proteins and their annotated locations for XP_010801150.1

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    34. XM_015461921.3 → XP_015317407.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    35. XM_059881036.1 → XP_059737019.1  ubiquitin-associated protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0AAA9TFY7

    36. XM_024984145.2 → XP_024839913.1  ubiquitin-associated protein 2-like isoform X25

      UniProtKB/TrEMBL
      A6QLT5, F6PRN0
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    37. XM_010802867.4 → XP_010801169.1  ubiquitin-associated protein 2-like isoform X25

      See identical proteins and their annotated locations for XP_010801169.1

      UniProtKB/TrEMBL
      A6QLT5, F6PRN0
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2

    38. XM_010802866.4 → XP_010801168.1  ubiquitin-associated protein 2-like isoform X24

      UniProtKB/TrEMBL
      F6PRN0
      Related
      ENSBTAP00070018974.1, ENSBTAT00070032373.1
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:507 → 534
      DUF3697; Ubiquitin-associated protein 2

    39. XM_010802865.4 → XP_010801167.1  ubiquitin-associated protein 2-like isoform X23

      UniProtKB/TrEMBL
      F6PRN0
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:527 → 554
      DUF3697; Ubiquitin-associated protein 2

    40. XM_024984155.2 → XP_024839923.1  ubiquitin-associated protein 2-like isoform X25

      UniProtKB/TrEMBL
      A6QLT5, F6PRN0
      Conserved Domains (2) summary
      cd14277
      Location:50 → 87
      UBA_UBP2_like; UBA domain found in ubiquitin-associated protein 2 (UBAP-2) like proteins
      pfam12478
      Location:496 → 523
      DUF3697; Ubiquitin-associated protein 2
    Nucleotide Protein Strain
    Heading Accession and Version

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