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    LOX lysyl oxidase [ Bos taurus (domestic cattle) ]

    Gene ID: 280841, updated on 1-Jan-2025

    Summary

    Official Symbol
    LOXprovided by VGNC
    Official Full Name
    lysyl oxidaseprovided by VGNC
    Primary source
    VGNC:VGNC:30951
    See related
    BGD:BT14850; Ensembl:ENSBTAG00000012994
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See LOX in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (31755215..31767581)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene ZNF474-ZNF475 readthrough Neighboring gene zinc finger protein 474 Neighboring gene uncharacterized LOC132345725 Neighboring gene serum response factor binding protein 1 Neighboring gene uncharacterized LOC101907246

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein-lysine 6-oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in collagen fibril organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in peptidyl-lysine oxidation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    protein-lysine 6-oxidase
    NP_776357.2
    XP_005209160.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173932.4NP_776357.2  protein-lysine 6-oxidase precursor

      Status: PROVISIONAL

      Source sequence(s)
      BC140667
      UniProtKB/Swiss-Prot
      P33072, Q95L38
      UniProtKB/TrEMBL
      A5D7S7
      Related
      ENSBTAP00000017275.3, ENSBTAT00000017275.5
      Conserved Domains (1) summary
      pfam01186
      Location:214414
      Lysyl_oxidase; Lysyl oxidase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      31755215..31767581
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005209103.5XP_005209160.1  protein-lysine 6-oxidase isoform X1

      UniProtKB/Swiss-Prot
      P33072, Q95L38
      Conserved Domains (1) summary
      pfam01186
      Location:214410
      Lysyl_oxidase; Lysyl oxidase