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    LOC117657954 sodium/potassium-transporting ATPase subunit alpha-2-like [ Pantherophis guttatus ]

    Gene ID: 117657954, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC117657954
    Gene description
    sodium/potassium-transporting ATPase subunit alpha-2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pantherophis guttatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
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    Genomic context

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    See LOC117657954 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844202.1 (624826..628293)
    100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023024215.1 (16681..20258)

    NW_026844202.1Genomic Context describing neighboring genes Neighboring gene notchless homolog 1 Neighboring gene A-kinase anchoring protein 10 Neighboring gene LHFPL tetraspan subfamily member 7 Neighboring gene spermatogenesis associated 22 Neighboring gene aspartoacylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type sodium:potassium-exchanging transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion export across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: sodium/potassium-transporting ATPase subunit alpha-2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CU_Pguttatus_1

    Genomic

    1. NW_026844202.1 Reference CU_Pguttatus_1

      Range
      624826..628293
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034406065.2 → XP_034261956.2  LOW QUALITY PROTEIN: sodium/potassium-transporting ATPase subunit alpha-2-like

      UniProtKB/TrEMBL
      A0A6P9B0M4
    Nucleotide Protein
    Heading Accession and Version

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