U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SPATA22 spermatogenesis associated 22 [ Pantherophis guttatus ]

    Gene ID: 117657213, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SPATA22
    Gene description
    spermatogenesis associated 22
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pantherophis guttatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SPATA22 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844202.1 (661482..679910, complement)
    100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023017783.1 (15687..33571)

    NW_026844202.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 10 Neighboring gene LHFPL tetraspan subfamily member 7 Neighboring gene sodium/potassium-transporting ATPase subunit alpha-2-like Neighboring gene aspartoacylase Neighboring gene transient receptor potential cation channel subfamily V member 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic DNA repair synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    spermatogenesis-associated protein 22

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CU_Pguttatus_1

    Genomic

    1. NW_026844202.1 Reference CU_Pguttatus_1

      Range
      661482..679910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034405353.2 → XP_034261244.2  spermatogenesis-associated protein 22 isoform X3

      UniProtKB/TrEMBL
      A0A6P9ARW4

    2. XM_034405352.2 → XP_034261243.2  spermatogenesis-associated protein 22 isoform X3

      UniProtKB/TrEMBL
      A0A6P9ARW4

    3. XM_034405354.2 → XP_034261245.2  spermatogenesis-associated protein 22 isoform X3

      UniProtKB/TrEMBL
      A0A6P9ARW4

    4. XM_034405350.2 → XP_034261241.2  spermatogenesis-associated protein 22 isoform X1

      UniProtKB/TrEMBL
      A0A6P9AYR9

    5. XM_034405351.2 → XP_034261242.2  spermatogenesis-associated protein 22 isoform X2

      UniProtKB/TrEMBL
      A0A6P9ARM9
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.