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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001304432.2 → NP_001291361.1 eukaryotic translation initiation factor 4 gamma 1 isoform c
See identical proteins and their annotated locations for NP_001291361.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform c), compared to isoform a.
- Source sequence(s)
-
AC087898
- Consensus CDS
-
CCDS84213.1
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Related
- ENSMUSP00000111123.2, ENSMUST00000115463.8
- Conserved Domains (3) summary
-
- cd11559
Location:1427 → 1556
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- pfam02847
Location:1228 → 1340
- MA3; MA3 domain
- pfam02854
Location:758 → 986
- MIF4G; MIF4G domain
-
NM_001403460.1 → NP_001390389.1 eukaryotic translation initiation factor 4 gamma 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9PVC5
- Related
- ENSMUSP00000111121.2, ENSMUST00000115461.8
-
NM_001403461.1 → NP_001390390.1 eukaryotic translation initiation factor 4 gamma 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9PVC5
-
NM_001403462.1 → NP_001390391.1 eukaryotic translation initiation factor 4 gamma 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9Q9E1
- Related
- ENSMUSP00000073506.6, ENSMUST00000073840.12
-
NM_001403463.1 → NP_001390392.1 eukaryotic translation initiation factor 4 gamma 1 isoform c
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
-
A0A0J9YUS5
-
NM_001403464.1 → NP_001390393.1 eukaryotic translation initiation factor 4 gamma 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
-
A0A0J9YUS5
-
NM_001403465.1 → NP_001390394.1 eukaryotic translation initiation factor 4 gamma 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
-
A0A0J9YUS5
-
NM_001403466.1 → NP_001390395.1 eukaryotic translation initiation factor 4 gamma 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9PVC6
-
NM_001403467.1 → NP_001390396.1 eukaryotic translation initiation factor 4 gamma 1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
-
A0A0J9YUS5
-
NM_001403468.1 → NP_001390397.1 eukaryotic translation initiation factor 4 gamma 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC087898
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Related
-
ENSMUST00000132320.8
-
NM_145941.4 → NP_666053.2 eukaryotic translation initiation factor 4 gamma 1 isoform a
See identical proteins and their annotated locations for NP_666053.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AC087898
- Consensus CDS
-
CCDS28055.1
- UniProtKB/Swiss-Prot
- Q6NZJ6, Q6NZN8, Q8BW99
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Related
- ENSMUSP00000047678.8, ENSMUST00000044783.14
- Conserved Domains (5) summary
-
- cd11559
Location:1441 → 1570
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:4 → 463
- PHA03247; large tegument protein UL36; Provisional
- TIGR00600
Location:373 → 612
- rad2; DNA excision repair protein (rad2)
- pfam02847
Location:1242 → 1354
- MA3; MA3 domain
- pfam02854
Location:765 → 993
- MIF4G; MIF4G domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
20491457..20511633
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006521935.2 → XP_006521998.1 eukaryotic translation initiation factor 4 gamma 1 isoform X1
See identical proteins and their annotated locations for XP_006521998.1
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1442 → 1571
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:4 → 463
- PHA03247; large tegument protein UL36; Provisional
- TIGR00600
Location:373 → 612
- rad2; DNA excision repair protein (rad2)
- pfam02847
Location:1243 → 1355
- MA3; MA3 domain
- pfam02854
Location:766 → 994
- MIF4G; MIF4G domain
-
XM_006521937.2 → XP_006522000.1 eukaryotic translation initiation factor 4 gamma 1 isoform X2
See identical proteins and their annotated locations for XP_006522000.1
- UniProtKB/Swiss-Prot
- Q6NZJ6, Q6NZN8, Q8BW99
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1441 → 1570
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:4 → 463
- PHA03247; large tegument protein UL36; Provisional
- TIGR00600
Location:373 → 612
- rad2; DNA excision repair protein (rad2)
- pfam02847
Location:1242 → 1354
- MA3; MA3 domain
- pfam02854
Location:765 → 993
- MIF4G; MIF4G domain
-
XM_011245861.2 → XP_011244163.1 eukaryotic translation initiation factor 4 gamma 1 isoform X5
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1432 → 1561
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:7 → 560
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1233 → 1345
- MA3; MA3 domain
- pfam02854
Location:756 → 984
- MIF4G; MIF4G domain
-
XM_030249023.2 → XP_030104883.1 eukaryotic translation initiation factor 4 gamma 1 isoform X6
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1431 → 1560
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:7 → 560
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1232 → 1344
- MA3; MA3 domain
- pfam02854
Location:755 → 983
- MIF4G; MIF4G domain
-
XM_006521940.5 → XP_006522003.1 eukaryotic translation initiation factor 4 gamma 1 isoform X4
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9Q9E1
- Conserved Domains (5) summary
-
- cd11559
Location:1434 → 1563
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:4 → 456
- PHA03247; large tegument protein UL36; Provisional
- TIGR00600
Location:366 → 605
- rad2; DNA excision repair protein (rad2)
- pfam02847
Location:1235 → 1347
- MA3; MA3 domain
- pfam02854
Location:758 → 986
- MIF4G; MIF4G domain
-
XM_006521944.4 → XP_006522007.1 eukaryotic translation initiation factor 4 gamma 1 isoform X10
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1395 → 1524
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:2 → 523
- PHA03247; large tegument protein UL36; Provisional
- pfam05109
Location:156 → 415
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam02847
Location:1196 → 1308
- MA3; MA3 domain
- pfam02854
Location:719 → 947
- MIF4G; MIF4G domain
-
XM_006521943.2 → XP_006522006.1 eukaryotic translation initiation factor 4 gamma 1 isoform X9
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1402 → 1531
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:20 → 530
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1203 → 1315
- MA3; MA3 domain
- pfam02854
Location:726 → 954
- MIF4G; MIF4G domain
-
XM_036159852.1 → XP_036015745.1 eukaryotic translation initiation factor 4 gamma 1 isoform X11
- UniProtKB/TrEMBL
- A0A0J9YUS5, E9PVC6
- Related
- ENSMUSP00000111117.2, ENSMUST00000115457.8
- Conserved Domains (5) summary
-
- cd11559
Location:1394 → 1523
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:2 → 523
- PHA03247; large tegument protein UL36; Provisional
- pfam05109
Location:156 → 415
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam02847
Location:1195 → 1307
- MA3; MA3 domain
- pfam02854
Location:718 → 946
- MIF4G; MIF4G domain
-
XM_036159855.1 → XP_036015748.1 eukaryotic translation initiation factor 4 gamma 1 isoform X14
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1384 → 1513
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- TIGR00600
Location:316 → 555
- rad2; DNA excision repair protein (rad2)
- pfam05109
Location:146 → 405
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam02847
Location:1185 → 1297
- MA3; MA3 domain
- pfam02854
Location:708 → 936
- MIF4G; MIF4G domain
-
XM_006521936.3 → XP_006521999.1 eukaryotic translation initiation factor 4 gamma 1 isoform X1
See identical proteins and their annotated locations for XP_006521999.1
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1442 → 1571
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:4 → 463
- PHA03247; large tegument protein UL36; Provisional
- TIGR00600
Location:373 → 612
- rad2; DNA excision repair protein (rad2)
- pfam02847
Location:1243 → 1355
- MA3; MA3 domain
- pfam02854
Location:766 → 994
- MIF4G; MIF4G domain
-
XM_030249025.2 → XP_030104885.1 eukaryotic translation initiation factor 4 gamma 1 isoform X9
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1402 → 1531
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:20 → 530
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1203 → 1315
- MA3; MA3 domain
- pfam02854
Location:726 → 954
- MIF4G; MIF4G domain
-
XM_006521945.2 → XP_006522008.1 eukaryotic translation initiation factor 4 gamma 1 isoform X12
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1392 → 1521
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:73 → 520
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1193 → 1305
- MA3; MA3 domain
- pfam02854
Location:716 → 944
- MIF4G; MIF4G domain
-
XM_030249026.2 → XP_030104886.1 eukaryotic translation initiation factor 4 gamma 1 isoform X10
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (5) summary
-
- cd11559
Location:1395 → 1524
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:2 → 523
- PHA03247; large tegument protein UL36; Provisional
- pfam05109
Location:156 → 415
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- pfam02847
Location:1196 → 1308
- MA3; MA3 domain
- pfam02854
Location:719 → 947
- MIF4G; MIF4G domain
-
XM_036159856.1 → XP_036015749.1 eukaryotic translation initiation factor 4 gamma 1 isoform X16
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Related
- ENSMUSP00000144320.2, ENSMUST00000143939.8
- Conserved Domains (4) summary
-
- cd11559
Location:1347 → 1476
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:19 → 476
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1148 → 1260
- MA3; MA3 domain
- pfam02854
Location:671 → 899
- MIF4G; MIF4G domain
-
XM_030249027.2 → XP_030104887.1 eukaryotic translation initiation factor 4 gamma 1 isoform X17
- UniProtKB/TrEMBL
-
A0A0J9YUS5
- Conserved Domains (4) summary
-
- cd11559
Location:1338 → 1467
- W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
- PHA03247
Location:19 → 466
- PHA03247; large tegument protein UL36; Provisional
- pfam02847
Location:1139 → 1251
- MA3; MA3 domain
- pfam02854
Location:662 → 890
- MIF4G; MIF4G domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001005331.1: Suppressed sequence
- Description
- NM_001005331.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.