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    TMEM132D-AS2 TMEM132D antisense RNA 2 [ Homo sapiens (human) ]

    Gene ID: 101927735, updated on 10-Dec-2024

    Summary

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    Official Symbol
    TMEM132D-AS2provided by HGNC
    Official Full Name
    TMEM132D antisense RNA 2provided by HGNC
    Primary source
    HGNC:HGNC:53324
    See related
    Ensembl:ENSG00000256699 AllianceGenome:HGNC:53324
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.3) See more
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    Genomic context

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    See TMEM132D-AS2 in Genome Data Viewer
    Location:
    12q24.33
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (129208601..129212662)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (129239813..129243874)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (129693146..129697207)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903086 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25393 Neighboring gene TMEM132D antisense RNA 1 Neighboring gene transmembrane protein 132D Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:129694216-129695415 Neighboring gene tRNA-Ile (anticodon AAT) 11-1 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:129818221-129818407 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:129820840-129821772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:129821773-129822705 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_25486 and experimental_25487 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25513 Neighboring gene uncharacterized LOC105370074

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110058.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC040912
      Related
      ENST00000542578.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      129208601..129212662
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      129239813..129243874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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