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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001270855.1 → NP_001257784.1 stathmin-4 isoform b
See identical proteins and their annotated locations for NP_001257784.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an alternate exon in the 3' end compared to variant 1. This exon has an in-frame stop codon, resulting in an isoform (b) with a shorter and distinct C-terminus compared to isoform a. Variants 2 and 6 both encode the same isoform (b).
- Source sequence(s)
-
BC092646, JAXUCZ010000015
- UniProtKB/TrEMBL
-
Q568Y8
- Conserved Domains (1) summary
-
- pfam00836
Location:76 → 203
- Stathmin; Stathmin family
-
NM_001270856.1 → NP_001257785.1 stathmin-4 isoform c
See identical proteins and their annotated locations for NP_001257785.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
BC092646, JAXUCZ010000015
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
- A6K6M7, A6K6M9
- Conserved Domains (1) summary
-
- pfam00836
Location:49 → 184
- Stathmin; Stathmin family
-
NM_001270857.1 → NP_001257786.1 stathmin-4 isoform d
See identical proteins and their annotated locations for NP_001257786.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon and uses an alternate in-frame splice junction at the 5' end of the next exon compared to variant 1. The resulting isoform (d) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
BC092646, JAXUCZ010000015
- UniProtKB/TrEMBL
-
A6K6M7
- Related
- ENSRNOP00000069450.2, ENSRNOT00000087709.3
- Conserved Domains (1) summary
-
- pfam00836
Location:48 → 183
- Stathmin; Stathmin family
-
NM_001270858.1 → NP_001257787.1 stathmin-4 isoform e
See identical proteins and their annotated locations for NP_001257787.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon and has an alternate exon in the 3' end compared to variant 1. This additional exon has an in-frame stop codon, resulting in an isoform (e) with a shorter and distinct C-terminus and lacking an alternate internal segment compared to isoform a.
- Source sequence(s)
-
BC092646, JAXUCZ010000015
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
-
Q568Y8
- Related
- ENSRNOP00000108777.1, ENSRNOT00000158569.1
- Conserved Domains (1) summary
-
- pfam00836
Location:49 → 176
- Stathmin; Stathmin family
-
NM_001270859.1 → NP_001257788.1 stathmin-4 isoform b
See identical proteins and their annotated locations for NP_001257788.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and has an alternate exon in the 3' end compared to variant 1. This exon has an in-frame stop codon, resulting in an isoform (b) with a shorter and distinct C-terminus compared to isoform a. Variants 2 and 6 both encode the same isoform (b).
- Source sequence(s)
-
BC092646, CB580507
- UniProtKB/TrEMBL
-
Q568Y8
- Related
- ENSRNOP00000072524.1, ENSRNOT00000084753.3
- Conserved Domains (1) summary
-
- pfam00836
Location:76 → 203
- Stathmin; Stathmin family
-
NM_019176.2 → NP_062049.1 stathmin-4 isoform a
See identical proteins and their annotated locations for NP_062049.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
BC092646, JAXUCZ010000015
- UniProtKB/TrEMBL
- A6K6M6, A6K6M7
- Conserved Domains (1) summary
-
- pfam00836
Location:76 → 211
- Stathmin; Stathmin family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086033.1 Reference GRCr8
- Range
-
44716825..44734776
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_008770778.3 → XP_008769000.1 stathmin-4 isoform X2
- UniProtKB/TrEMBL
-
A6K6M7
- Conserved Domains (1) summary
-
- pfam00836
Location:75 → 210
- Stathmin; Stathmin family
-
XM_063274689.1 → XP_063130759.1 stathmin-4 isoform X5
-
XM_063274678.1 → XP_063130748.1 stathmin-4 isoform X1
- UniProtKB/TrEMBL
- A6K6M6, A6K6M7
-
XM_039093677.2 → XP_038949605.1 stathmin-4 isoform X1
- UniProtKB/TrEMBL
- A6K6M6, A6K6M7
- Conserved Domains (1) summary
-
- pfam00836
Location:76 → 211
- Stathmin; Stathmin family
-
XM_063274681.1 → XP_063130751.1 stathmin-4 isoform X2
- UniProtKB/TrEMBL
-
A6K6M7
-
XM_063274687.1 → XP_063130757.1 stathmin-4 isoform X4
- UniProtKB/TrEMBL
-
A6K6M7
-
XM_063274686.1 → XP_063130756.1 stathmin-4 isoform X4
- UniProtKB/TrEMBL
-
A6K6M7
-
XM_063274683.1 → XP_063130753.1 stathmin-4 isoform X3
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
- A6K6M7, A6K6M9
-
XM_063274682.1 → XP_063130752.1 stathmin-4 isoform X3
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
- A6K6M7, A6K6M9
-
XM_039093679.1 → XP_038949607.1 stathmin-4 isoform X4
- UniProtKB/TrEMBL
-
A6K6M7
- Conserved Domains (1) summary
-
- pfam00836
Location:48 → 183
- Stathmin; Stathmin family
-
XM_063274684.1 → XP_063130754.1 stathmin-4 isoform X3
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
- A6K6M7, A6K6M9
-
XM_063274679.1 → XP_063130749.1 stathmin-4 isoform X1
- UniProtKB/TrEMBL
- A6K6M6, A6K6M7
-
XM_063274680.1 → XP_063130750.1 stathmin-4 isoform X1
- UniProtKB/TrEMBL
- A6K6M6, A6K6M7
- Related
- ENSRNOP00000073294.1, ENSRNOT00000091567.3
-
XM_063274685.1 → XP_063130755.1 stathmin-4 isoform X3
- UniProtKB/Swiss-Prot
-
P63043
- UniProtKB/TrEMBL
- A6K6M7, A6K6M9
-
XM_063274688.1 → XP_063130758.1 stathmin-4 isoform X4
- UniProtKB/TrEMBL
-
A6K6M7