U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    IFNK interferon kappa [ Pan troglodytes (chimpanzee) ]

    Gene ID: 473120, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IFNKprovided by VGNC
    Official Full Name
    interferon kappaprovided by VGNC
    Primary source
    VGNC:VGNC:8899
    Locus tag
    CK820_G0014606
    See related
    Ensembl:ENSPTRG00000020838
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    IF1FA
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IFNK in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (88404730..88405408, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (30463372..30464000)

    Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene C9orf72-SMCR8 complex subunit Neighboring gene uncharacterized LOC129136092 Neighboring gene melanoma inhibitory activity protein 2-like Neighboring gene MOB kinase activator 3B Neighboring gene uncharacterized LOC104007835 Neighboring gene equatorin Neighboring gene TEK receptor tyrosine kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    interferon kappa
    Names
    interferon 1FA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      88404730..88405408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016960703.4 → XP_016816192.3  interferon kappa

      UniProtKB/TrEMBL
      A0A2J8QSQ8
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials