U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    FLCN folliculin [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102363066, updated on 2-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    FLCN
    Gene description
    folliculin
    See related
    Ensembl:ENSLACG00000009454
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FLCN in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 5 NC_088143.1 (115466477..115491712)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005820296.1 (422875..448090, complement)

    Chromosome 5 - NC_088143.1Genomic Context describing neighboring genes Neighboring gene 5'(3')-deoxyribonucleotidase, mitochondrial Neighboring gene uncharacterized LOC135357209 Neighboring gene COP9 signalosome subunit 3 Neighboring gene putative leucine-rich repeat-containing protein DDB_G0290503 Neighboring gene phospholipase D family, member 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of TORC1 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    folliculin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088143.1 Reference fLatCha1.pri

      Range
      115466477..115491712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014494570.2 → XP_014350056.1  folliculin isoform X1

    2. XM_064558980.1 → XP_064415050.1  folliculin isoform X1

    3. XM_014494571.2 → XP_014350057.1  folliculin isoform X1

    4. XM_014494572.2 → XP_014350058.1  folliculin isoform X2

      UniProtKB/TrEMBL
      H3AM66
      Related
      ENSLACP00000010737.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.