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    mrpl3 mitochondrial 54S ribosomal protein mL44 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541040, updated on 18-Sep-2024

    Summary

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    Official Symbol
    mrpl3
    Official Full Name
    mitochondrial 54S ribosomal protein mL44
    Primary source
    PomBase:SPBC3B9.14c
    Locus tag
    SPOM_SPBC3B9.14C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See mrpl3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (4009482..4010871, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specificity factor complex subunit Ctf1 Neighboring gene ncRNA Neighboring gene TRAPP complex subunit Trs23 Neighboring gene ncRNA Neighboring gene ribosomal protein P1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Sre1 cleavage-activating protein Scap Scp1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables double-stranded RNA binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables ribonuclease III activity ISM
    Inferred from Sequence Model
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm HDA PubMed 
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrial 54S ribosomal protein mL44

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4009482..4010871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022594.3 → NP_596672.1  mitochondrial 54S ribosomal protein mL44 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596672.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43042
      Conserved Domains (3) summary
      smart00535
      Location:65 → 209
      RIBOc; Ribonuclease III family
      smart00358
      Location:217 → 285
      DSRM; Double-stranded RNA binding motif
      COG0571
      Location:40 → 290
      Rnc; dsRNA-specific ribonuclease [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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