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    obst-H obstructor-H [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39681, updated on 9-Dec-2024

    Summary

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    Official Symbol
    obst-Hprovided by FlyBase
    Official Full Name
    obstructor-Hprovided by FlyBase
    Primary source
    FLYBASE:FBgn0053983
    Locus tag
    Dmel_CG33983
    See related
    AllianceGenome:FB:FBgn0053983
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17014; CG33983; CG7973; CG7973(short); Dmel\CG33983; FBgn0036507
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in chitin-based extracellular matrix. Is expressed in embryonic/larval garland cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See obst-H in Genome Data Viewer
    Location:
    71E1-71E1; 3-43 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15528265..15529243, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15521365..15522343, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cyclic-AMP response element binding protein A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the novel evolutionary conserved obstructor multigene family in invertebrates. Behr M, et al. FEBS Lett, 2005 Dec 19. PMID 16325182
    2. A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. Pauli A, et al. Curr Biol, 2010 Oct 26. PMID 20933422, Free PMC Article
    3. Hormone-response genes are direct in vivo regulatory targets of Brahma (SWI/SNF) complex function. Zraly CB, et al. J Biol Chem, 2006 Nov 17. PMID 16990270
    4. Activating transcription factor 3 regulates immune and metabolic homeostasis. Rynes J, et al. Mol Cell Biol, 2012 Oct. PMID 22851689, Free PMC Article
    5. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables chitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    obstructor-H
    Names
    CG33983-PA
    obst-H-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15528265..15529243 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038931.2 → NP_001034020.1  obstructor-H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001034020.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KUN4
      Conserved Domains (2) summary
      smart00494
      Location:203 → 240
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:142 → 184
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KUN4 Q7KUN4

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