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    CG33170 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326267, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG33170provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0053170
    Locus tag
    Dmel_CG33170
    See related
    AllianceGenome:FB:FBgn0053170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT30788; CG8244; Dmel\CG33170
    Summary
    Is expressed in adult head and spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG33170 in Genome Data Viewer
    Location:
    80B1-80B1; 3-47 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22864600..22867535)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22857700..22860635)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ER membrane protein complex subunit 4 Neighboring gene ncRNA Neighboring gene ADP ribosylation factor 1 Neighboring gene antisense RNA:CR45969

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generating customized transgene landing sites and multi-transgene arrays in Drosophila using phiC31 integrase. Knapp JM, et al. Genetics, 2015 Apr. PMID 25680812, Free PMC Article
    2. Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq. Aspden JL, et al. Elife, 2014 Aug 21. PMID 25144939, Free PMC Article
    3. Hidden genetic variation shapes the structure of functional elements in Drosophila. Chakraborty M, et al. Nat Genet, 2018 Jan. PMID 29255259, Free PMC Article
    4. FISH analysis of Drosophila melanogaster heterochromatin using BACs and P elements. Corradini N, et al. Chromosoma, 2003 Jul. PMID 12827380
    5. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG33170-PA
    CG33170-PB
    CG33170-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22864600..22867535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144528.2 → NP_001138000.1  uncharacterized protein Dmel_CG33170, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138000.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QY7
      Conserved Domains (1) summary
      pfam15054
      Location:4 → 49
      DUF4535; Domain of unknown function (DUF4535)

    2. NM_001275295.1 → NP_001262224.1  uncharacterized protein Dmel_CG33170, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QY7
      Conserved Domains (1) summary
      pfam15054
      Location:4 → 49
      DUF4535; Domain of unknown function (DUF4535)

    3. NM_176391.4 → NP_788569.1  uncharacterized protein Dmel_CG33170, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788569.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H8F4T1, Q86BG3
      Related
      FBpp0088777
      Conserved Domains (1) summary
      pfam15054
      Location:51 → 96
      DUF4535; Domain of unknown function (DUF4535)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29QY7 Q29QY7
    Q86BG3 Q86BG3
    Q8IH85 Q8IH85

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