U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Nmur1 neuromedin U receptor 1 [ Mus musculus (house mouse) ]

    Gene ID: 14767, updated on 27-Nov-2024

    Summary

    Official Symbol
    Nmur1provided by MGI
    Official Full Name
    neuromedin U receptor 1provided by MGI
    Primary source
    MGI:MGI:1341898
    See related
    Ensembl:ENSMUSG00000026237 AllianceGenome:MGI:1341898
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    FM-3; Gpr66; NMU1R; NmU-R; NMU-R1
    Summary
    Enables neuropeptide receptor activity. Acts upstream of or within neuropeptide signaling pathway. Is active in cilium. Is expressed in brain; esophagus; and male reproductive gland or organ. Orthologous to human NMUR1 (neuromedin U receptor 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 6.3), small intestine adult (RPKM 3.0) and 6 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Nmur1 in Genome Data Viewer
    Location:
    1 C5; 1 43.94 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (86313964..86317083, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (86386242..86389361, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene nucleolin Neighboring gene RIKEN cDNA C130036L24 gene Neighboring gene STARR-positive B cell enhancer ABC_E406 Neighboring gene small nucleolar RNA, C/D box 82 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:88320435-88320760 Neighboring gene STARR-positive B cell enhancer ABC_E1553 Neighboring gene testis expressed 44 Neighboring gene predicted gene, 32700 Neighboring gene STARR-positive B cell enhancer ABC_E3286

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuromedin U binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuromedin U binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuromedin U receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuromedin U receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide receptor activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    neuromedin-U receptor 1
    Names
    G protein-coupled receptor 66

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001319227.1NP_001306156.1  neuromedin-U receptor 1 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AC102609, BC120822
      Consensus CDS
      CCDS15119.2
      UniProtKB/Swiss-Prot
      G5E871, O55040, Q0VB23
      UniProtKB/TrEMBL
      A0A1C7ZMY0
      Related
      ENSMUSP00000148767.2, ENSMUST00000212058.2
      Conserved Domains (2) summary
      pfam00001
      Location:77357
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:64195
      7tm_4; Olfactory receptor
    2. NM_010341.1NP_034471.1  neuromedin-U receptor 1 isoform 2

      See identical proteins and their annotated locations for NP_034471.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the UTRs and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus than isoform 1.
      Source sequence(s)
      AF044602
      Consensus CDS
      CCDS83570.1
      UniProtKB/TrEMBL
      A0A1C7ZMY0
      Related
      ENSMUSP00000027440.6, ENSMUST00000027440.7
      Conserved Domains (2) summary
      pfam00001
      Location:54334
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:41172
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      86313964..86317083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)