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    DNAAF8 dynein axonemal assembly factor 8 [ Bos taurus (domestic cattle) ]

    Gene ID: 618674, updated on 31-Dec-2024

    Summary

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    Gene symbol
    DNAAF8
    Gene description
    dynein axonemal assembly factor 8
    See related
    BGD:BT28168; Ensembl:ENSBTAG00000006595
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    DAAP1; C16orf71; C25H16orf71
    Orthologs
    human mouse all
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    Genomic context

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    See DNAAF8 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (3820559..3831147)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene mahogunin ring finger 1 Neighboring gene nudix hydrolase 16 like 1 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 3 Neighboring gene uncharacterized LOC132343895 Neighboring gene zinc finger protein 500 Neighboring gene uncharacterized LOC132343896 Neighboring gene septin 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137290

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dynein axonemal particle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynein axonemal assembly factor 8
    Names
    chromosome 25 C16orf71 homolog
    dynein axonemal-associated protein 1
    uncharacterized protein C16orf71 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001435358.1 → NP_001422287.1  dynein axonemal assembly factor 8 isoform 1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000025

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      3820559..3831147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881445.1 → XP_059737428.1  dynein axonemal assembly factor 8 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1N7R3, E1BFT7
      Related
      ENSBTAP00000066861.2, ENSBTAT00000074430.2

    2. XM_024985056.2 → XP_024840824.1  dynein axonemal assembly factor 8 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1N7R3, E1BFT7
      Related
      ENSBTAP00000008661.6, ENSBTAT00000008661.6
      Conserved Domains (1) summary
      pfam15773
      Location:14 → 524
      DUF4701; Domain of unknown function (DUF4701)

    3. XM_024985057.2 → XP_024840825.1  dynein axonemal assembly factor 8 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1N7R3
      Conserved Domains (1) summary
      pfam15773
      Location:14 → 508
      DUF4701; Domain of unknown function (DUF4701)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001046621.2: Suppressed sequence

      Description
      NM_001046621.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KIS6.1 GenPept UniProtKB/Swiss-Prot:Q2KIS6

    Gene LinkOut

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