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    • Showing Current items.

    ftr-1 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180320, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ftr-1
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00013756
    Locus tag
    CELE_Y113G7B.4
    See related
    AllianceGenome:WB:WBGene00013756
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See ftr-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (20196971..20198241)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DUF904 domain-containing protein Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class H Neighboring gene Uncharacterized protein Neighboring gene F-box domain-containing protein Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic and population-level effects of gene conversion in caenorhabditis paralogs. Katju V, et al. Genes (Basel), 2010 Dec 9. PMID 24710096, Free PMC Article
    2. Gene conversion and DNA sequence polymorphism in the sex-determination gene fog-2 and its paralog ftr-1 in Caenorhabditis elegans. Rane HS, et al. Mol Biol Evol, 2010 Jul. PMID 20133352, Free PMC Article
    3. Sex change by gene conversion in a Caenorhabditis elegans fog-2 mutant. Katju V, et al. Genetics, 2008 Sep. PMID 18757925, Free PMC Article
    4. Multiple Skp1-related proteins in Caenorhabditis elegans: diverse patterns of interaction with Cullins and F-box proteins. Yamanaka A, et al. Curr Biol, 2002 Feb 19. PMID 11864566
    5. fog-2 and the evolution of self-fertile hermaphroditism in Caenorhabditis. Nayak S, et al. PLoS Biol, 2005 Jan. PMID 15630478, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_507895.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      20196971..20198241
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075494.5 → NP_507895.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507895.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D5L4M4, G5EC06
      Conserved Domains (2) summary
      smart00256
      Location:23 → 63
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:145 → 283
      FTH; FTH domain
    Nucleotide Protein
    Heading Accession and Version

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