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    VDAC1P3 voltage dependent anion channel 1 pseudogene 3 [ Homo sapiens (human) ]

    Gene ID: 100310838, updated on 10-Dec-2024

    Summary

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    Official Symbol
    VDAC1P3provided by HGNC
    Official Full Name
    voltage dependent anion channel 1 pseudogene 3provided by HGNC
    Primary source
    HGNC:HGNC:37478
    See related
    AllianceGenome:HGNC:37478
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See VDAC1P3 in Genome Data Viewer
    Location:
    Xq21.31
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (91981802..91983514, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (90433911..90435623, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (91236801..91238513, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373293 Neighboring gene protocadherin 11 X-linked Neighboring gene RNA, U2 small nuclear 26, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chrX:91116529-91116701 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91354906-91355678 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91355679-91356451 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91357997-91358770 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91358771-91359542 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:91360316-91361087 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:91365337-91366118 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 10 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:91417763-91418440 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:91525883-91526412 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:91715176-91715676 Neighboring gene keratin 18 pseudogene 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and functional expression in yeast of two human isoforms of the outer mitochondrial membrane channel, the voltage-dependent anion channel. Blachly-Dyson E, et al. J Biol Chem, 1993 Jan 25. PMID 8420959
    2. Human genes encoding the voltage-dependent anion channel (VDAC) of the outer mitochondrial membrane: mapping and identification of two new isoforms. Blachly-Dyson E, et al. Genomics, 1994 Mar 1. PMID 7517385
    3. Utility of syntenic relationships of VDAC1 pseudogenes for not only an understanding of the phylogenetic divergence history of rodents, but also ascertaining possible pseudogene candidates as genuine pseudogenes. Ido Y, et al. Genomics, 2014 Aug. PMID 24858958

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_013287.3 

      Range
      101..1813
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      91981802..91983514 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      90433911..90435623 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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