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    Mir5130 microRNA 5130 [ Mus musculus (house mouse) ]

    Gene ID: 100628599, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mir5130provided by MGI
    Official Full Name
    microRNA 5130provided by MGI
    Primary source
    MGI:MGI:4950455
    See related
    Ensembl:ENSMUSG00000092901 miRBase:MI0018042; AllianceGenome:MGI:4950455
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mir-5130; mu-mir-5130; mmu-mir-5130
    Summary
    microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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    Genomic context

    See Mir5130 in Genome Data Viewer
    Location:
    14 E2.3; 14 51.55 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (103219985..103220068, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (102982549..102982632, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4124 Neighboring gene predicted gene, 41234 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:103209351-103209504 Neighboring gene predicted gene, 34589 Neighboring gene STARR-positive B cell enhancer ABC_E11577 Neighboring gene STARR-positive B cell enhancer ABC_E8575 Neighboring gene STARR-positive B cell enhancer ABC_E7345 Neighboring gene STARR-positive B cell enhancer ABC_E7346 Neighboring gene STARR-positive B cell enhancer ABC_E5463 Neighboring gene STARR-positive B cell enhancer ABC_E10837 Neighboring gene RIKEN cDNA 4933432I03 gene Neighboring gene STARR-positive B cell enhancer mm9_chr14:103394496-103394797 Neighboring gene potassium channel tetramerisation domain containing 12 Neighboring gene STARR-positive B cell enhancer ABC_E11578 Neighboring gene ribosomal protein L17, pseudogene 7 Neighboring gene predicted gene, 34643

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_039592.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC102815
      Related
      ENSMUST00000175160.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      103219985..103220068 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)