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    Gphr golgi pH regulator [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100689387, updated on 19-Dec-2023

    Summary

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    Gene symbol
    Gphr
    Gene description
    golgi pH regulator
    Locus tag
    I79_004482
    See related
    Ensembl:ENSCGRG00015024835
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    GPR89
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    Genomic context

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    See Gphr in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613699.1 (489639..528712)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (59589003..59627763)

    NW_003613699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118239187 Neighboring gene gap junction protein alpha 8 Neighboring gene interferon-induced transmembrane protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene PDZ domain containing 1 Neighboring gene ring finger protein 115 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GPHR is a novel anion channel critical for acidification and functions of the Golgi apparatus. Maeda Y, et al. Nat Cell Biol, 2008 Oct. PMID 18794847
    2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables voltage-gated monoatomic anion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular pH reduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Golgi pH regulator
    Names
    Protein GPR89

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001246813.1 → NP_001233742.1  Golgi pH regulator

      See identical proteins and their annotated locations for NP_001233742.1

      Status: PROVISIONAL

      Source sequence(s)
      AB362891
      UniProtKB/Swiss-Prot
      B2ZXD5
      UniProtKB/TrEMBL
      A0A061IND1, A0A061IQ06
      Related
      ENSCGRP00015032957.2, ENSCGRT00015040201.2
      Conserved Domains (2) summary
      pfam12430
      Location:276 → 444
      ABA_GPCR; Abscisic acid G-protein coupled receptor
      pfam12537
      Location:140 → 207
      GPHR_N; The Golgi pH Regulator (GPHR) Family N-terminal

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613699.1 Reference CriGri_1.0 Primary Assembly

      Range
      489639..528712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035448023.1 → XP_035303914.1  Golgi pH regulator isoform X1

      UniProtKB/TrEMBL
      A0A8C2LU66
      Conserved Domains (2) summary
      pfam12430
      Location:218 → 388
      ABA_GPCR; Abscisic acid G-protein coupled receptor
      pfam12537
      Location:86 → 149
      GPHR_N; The Golgi pH Regulator (GPHR) Family N-terminal

    2. XM_016971701.3 → XP_016827190.1  Golgi pH regulator isoform X2

      UniProtKB/TrEMBL
      A0A8C2LU66

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276806.1 Alternate CriGri-PICRH-1.0

      Range
      59589003..59627763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B2ZXD5.1 GenPept UniProtKB/Swiss-Prot:B2ZXD5

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