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    4933412O06Rik RIKEN cDNA 4933412O06 gene [ Mus musculus (house mouse) ]

    Gene ID: 71071, updated on 26-Oct-2024

    Summary

    Official Symbol
    4933412O06Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933412O06 geneprovided by MGI
    Primary source
    MGI:MGI:1918321
    See related
    AllianceGenome:MGI:1918321
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 2.1), cortex adult (RPKM 0.4) and 3 other tissues See more
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    Genomic context

    See 4933412O06Rik in Genome Data Viewer
    Location:
    13; 13 A1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (15956249..15977215, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (15781664..15802630, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_33733 Neighboring gene predicted gene 6556 Neighboring gene GLI-Kruppel family member GLI3 Neighboring gene VISTA enhancer mm1912 Neighboring gene VISTA enhancer mm652 Neighboring gene VISTA enhancer mm2028 Neighboring gene VISTA enhancer mm1935 Neighboring gene RIKEN cDNA A530046M15 gene Neighboring gene predicted gene, 57607 Neighboring gene U1 small nuclear ribonucleoprotein 1C pseudogene Neighboring gene STARR-seq mESC enhancer starr_33739 Neighboring gene predicted gene, 31450

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045507.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK016796

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      15956249..15977215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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